RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 OR5R1Q8NH85 324 aa16.43■□□□□ 0.22
VSX1-203ENST00000409285 SSX3Q99909 188 aa16.43■□□□□ 0.22
VSX1-203ENST00000409285 TEX13DA0A0J9YY54 714 aaPredicted RBP16.42■□□□□ 0.22
VSX1-203ENST00000409285 IGKV1-16P04430 117 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 FAM106CPP0CH98 169 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 AKR1C4P17516 323 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 CBX3Q13185 183 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 SPAG16Q8N0X2 631 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 Q8N6K4 173 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 OR4C13Q8NGP0 309 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 SSMEM1Q8WWF3 244 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 TP53RKQ96S44 253 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 RNF5Q99942 180 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 POMT1Q9Y6A1 747 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 IGHV3-72A0A0B4J1Y9 119 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 FCGR3BO75015 233 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 SNRNP70P08621 437 aaKnown RBP16.42■□□□□ 0.22
VSX1-203ENST00000409285 OR4E1P0C645 316 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 RPA2P15927 270 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 ANXA7P20073 488 aaKnown RBP16.42■□□□□ 0.22
VSX1-203ENST00000409285 UCP1P25874 307 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 PPP1R1AQ13522 171 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 TMEM177Q53S58 311 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 TMEM86BQ8N661 226 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 OR2T10Q8NGZ9 312 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 OSR1Q8TAX0 266 aaPredicted RBP16.42■□□□□ 0.22
VSX1-203ENST00000409285 TMEM222Q9H0R3 208 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 PLEKHA2Q9HB19 425 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 KCNIP3Q9Y2W7 256 aa16.42■□□□□ 0.22
VSX1-203ENST00000409285 H7C2Y5 167 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 RAMP3O60896 148 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 MOSP00540 346 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 IGKV1D-33P01593 117 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 IGKV1-33P01594 117 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 OR5AC1P0C628 307 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 ANXA3P12429 323 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 ZNF585BQ52M93 769 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 SIGLECL1Q8N7X8 197 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 CAPSLQ8WWF8 208 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 ZDHHC16Q969W1 377 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 TCF19Q9Y242 345 aa16.41■□□□□ 0.22
VSX1-203ENST00000409285 INMT-MINDY4F8WBC2 141 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 H3BUX3 64 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 PRAF2O60831 178 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 HPRT1P00492 218 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 IFNA2P01563 188 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 IL5P05113 134 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 VSIG10L2P0DP72 767 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 DHRS2Q13268 280 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 OR2B11Q5JQS5 317 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 GLYATL2Q8WU03 294 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 FLYWCH2Q96CP2 140 aaKnown RBP16.4■□□□□ 0.22
VSX1-203ENST00000409285 EAF1Q96JC9 268 aaPredicted RBP16.4■□□□□ 0.22
VSX1-203ENST00000409285 COMMD9Q9P000 198 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 PITPNC1Q9UKF7 332 aa16.4■□□□□ 0.22
VSX1-203ENST00000409285 PIGBOS1A0A0B4J2F0 54 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 SFT2D2O95562 160 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 CDS2O95674 445 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 CRYZL1O95825 349 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 IGHV4-59P01825 116 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 HLA-AP01891 365 aaKnown RBP16.39■□□□□ 0.21
VSX1-203ENST00000409285 SRPXP78539 464 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 RBMS3Q6XE24 437 aaKnown RBP16.39■□□□□ 0.21
VSX1-203ENST00000409285 LIAT1Q6ZQX7 453 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 LYG2Q86SG7 212 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 OR8H1Q8NGG4 311 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 TNCP24821 2201 aa16.39■□□□□ 0.21
VSX1-203ENST00000409285 JMJD1CQ15652 2540 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 C9orf170A2RU37 121 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 BTBD17A6NE02 478 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 CLDN34H7C241 214 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 SPDEFO95238 335 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 DUS4LO95620 317 aaKnown RBP16.38■□□□□ 0.21
VSX1-203ENST00000409285 DHFRP00374 187 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 SERPINE2P07093 398 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 VAMP1P23763 118 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 LGALS7P47929 136 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 TMEM187Q14656 261 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 POU2AF1Q16633 256 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 C4orf46Q504U0 113 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 Q6ZNX1 250 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 C16orf82Q7Z2V1 217 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 CADM3Q8N126 398 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 LRTM2Q8N967 370 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 IL22RA2Q969J5 263 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 TMEM56Q96MV1 263 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 VPREB3Q9UKI3 123 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 TMEM56-RWDD3S4R434 201 aa16.38■□□□□ 0.21
VSX1-203ENST00000409285 A6NDX4 124 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 HOXA3O43365 443 aaPredicted RBP16.37■□□□□ 0.21
VSX1-203ENST00000409285 TMEM11P17152 192 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 CD24P25063 80 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 RIPPLY3P57055 190 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 HES1Q14469 280 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 SP6Q3SY56 376 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 FBLN7Q53RD9 439 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 ZNF418Q8TF45 676 aaPredicted RBP16.37■□□□□ 0.21
VSX1-203ENST00000409285 HARBI1Q96MB7 349 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 AIFM2Q9BRQ8 373 aa16.37■□□□□ 0.21
VSX1-203ENST00000409285 S1PR2O95136 353 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms