RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 C17orf47Q8NEP4 570 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 RBM38Q9H0Z9 239 aaKnown RBP12.07□□□□□ -0.48
AFF3-202ENST00000409236 TRPM3Q9HCF6 1732 aaPredicted RBP12.07□□□□□ -0.48
AFF3-202ENST00000409236 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
AFF3-202ENST00000409236 MRPL24Q96A35 216 aaKnown RBP12.07□□□□□ -0.48
AFF3-202ENST00000409236 HCFC2Q9Y5Z7 792 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 CCSMST1Q4G0I0 132 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 TMEM86BQ8N661 226 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 SBF2Q86WG5 1849 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 CEACAM4O75871 244 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 SMAD4Q13485 552 aaKnown RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 HIST1H2BAQ96A08 127 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 TRBV23-1A0A0A0MS06 115 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 PLAUP00749 431 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 SRSF12Q8WXF0 261 aaKnown RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 RLN3Q8WXF3 142 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 ISG15P05161 165 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 GPX4P36969 197 aaPredicted RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 TNFRSF9Q07011 255 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 OR51G1Q8NGK1 321 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 CNOT1A5YKK6 2376 aaKnown RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 K7ESM1 405 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 TNFSF14O43557 240 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 ATOH1Q92858 354 aaPredicted RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 RSPO3Q9BXY4 272 aaPredicted RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 C6orf106Q9H6K1 298 aaPredicted RBP12.06□□□□□ -0.48
AFF3-202ENST00000409236 LILRA5A6NI73 299 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 INSL4Q14641 139 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 FIZ1Q96SL8 496 aa12.06□□□□□ -0.48
AFF3-202ENST00000409236 SERGEFQ9UGK8 458 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 CD3EP07766 207 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 DMKNQ6E0U4 476 aaPredicted RBP12.05□□□□□ -0.48
AFF3-202ENST00000409236 LINC00615Q96LM1 132 aaPredicted RBP12.05□□□□□ -0.48
AFF3-202ENST00000409236 CBLN1P23435 193 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 SLC25A10Q9UBX3 287 aaPredicted RBP12.05□□□□□ -0.48
AFF3-202ENST00000409236 A0A1B0GUT8 65 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 ORMDL3Q8N138 153 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 OR11G2Q8NGC1 345 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 C8orf44Q96CB5 159 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 OGG1O15527 345 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 DMRTC1Q5HYR2 192 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 NDUFAF3Q9BU61 184 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 SFXN3Q9BWM7 321 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 PRDM14Q9GZV8 571 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
AFF3-202ENST00000409236 HYAL3O43820 417 aaPredicted RBP12.05□□□□□ -0.48
AFF3-202ENST00000409236 GGTLC2Q14390 218 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
AFF3-202ENST00000409236 LINC00614P0C842 121 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 CENPWQ5EE01 88 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 STARD6P59095 220 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 HIST1H4AP62805 103 aaKnown RBP12.04□□□□□ -0.48
AFF3-202ENST00000409236 OR10J3Q5JRS4 329 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
AFF3-202ENST00000409236 SF3B5Q9BWJ5 86 aaKnown RBP12.04□□□□□ -0.48
AFF3-202ENST00000409236 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 NDUFA3O95167 84 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 DEFB109BQ30KR1 87 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 MED13LQ71F56 2210 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 IGKV3D-11A0A0A0MRZ8 115 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 M0R2P5 195 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 IGKV3-11P04433 115 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 HMGA2P52926 109 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 MRM2Q9UI43 246 aaKnown RBP12.04□□□□□ -0.48
AFF3-202ENST00000409236 APELAP0DMC3 54 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 FRRS1LQ9P0K9 344 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 NAPSAO96009 420 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 OR4D11Q8NGI4 311 aa12.04□□□□□ -0.48
AFF3-202ENST00000409236 A0A1W2PP11 408 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 HOXD4P09016 255 aaPredicted RBP12.03□□□□□ -0.48
AFF3-202ENST00000409236 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 GNRHR2Q96P88 292 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 CXorf51AA0A1B0GTR3 108 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 LOC390937A0A1W2PQ73 354 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 CTLA4P16410 223 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 AMER3Q8N944 861 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 WNK1Q9H4A3 2382 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 C9orf172C9J069 976 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 LINC01549A6NIU2 74 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 TMEM238C9JI98 176 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 PRR35P0CG20 571 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 ARHGAP21Q5T5U3 1957 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 PDCD1Q15116 288 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 PRSS53Q2L4Q9 553 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 ALKAL1Q6UXT8 129 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms