RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 COL4A1P02462 1669 aa1.98□□□□□ -2.09
PTPN12-202ENST00000407343 DENND4BO75064 1496 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-202ENST00000407343 A0A087WUU8 490 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 C2orf74A8MZ97 194 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 IL6P05231 212 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 OCMP0CE72 109 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-202ENST00000407343 UGT2B7P16662 529 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 CTAG1AP78358 180 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 HLA-DRB3P79483 266 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 GPHB5Q86YW7 130 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 FAM9CQ8IZT9 166 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 MRPS24Q96EL2 167 aaKnown RBP1.97□□□□□ -2.09
PTPN12-202ENST00000407343 DCUN1D5Q9BTE7 237 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 PARVGQ9HBI0 331 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 PLEKHJ1Q9NW61 149 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 POLR3HQ9Y535 204 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-202ENST00000407343 ABCC12Q96J65 1359 aa1.97□□□□□ -2.09
PTPN12-202ENST00000407343 FN1P02751 2386 aaKnown RBP1.96□□□□□ -2.09
PTPN12-202ENST00000407343 TRGV5A0A0B4J1U4 118 aa1.96□□□□□ -2.1
PTPN12-202ENST00000407343 ZNF705FA8MVS1 300 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-202ENST00000407343 UBE2L6O14933 153 aa1.96□□□□□ -2.1
PTPN12-202ENST00000407343 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-202ENST00000407343 CXCR4P61073 352 aa1.96□□□□□ -2.1
PTPN12-202ENST00000407343 EBPQ15125 230 aaKnown RBP1.96□□□□□ -2.1
PTPN12-202ENST00000407343 ZNF791Q3KP31 576 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-202ENST00000407343 SAPCD1Q5SSQ6 148 aa1.96□□□□□ -2.1
PTPN12-202ENST00000407343 LHFPL1Q86WI0 220 aa1.96□□□□□ -2.1
PTPN12-202ENST00000407343 LLPHQ9BRT6 129 aaKnown RBP1.96□□□□□ -2.1
PTPN12-202ENST00000407343 RGS12O14924 1447 aa1.96□□□□□ -2.1
PTPN12-202ENST00000407343 ZNF532Q9HCE3 1301 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 TMSB15BA0A087X1C1 80 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 A0A1B0GVG6 124 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 HLA-DRAP01903 254 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 CTBP2P56545 445 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 MAP3K7CLP57077 242 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 PLEKHG7Q6ZR37 379 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 ARL5BQ96KC2 179 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 TMEM109Q9BVC6 243 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 TTTY13Q9BZ97 58 aa1.95□□□□□ -2.1
PTPN12-202ENST00000407343 MYO3BQ8WXR4 1341 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 PRRC2BQ5JSZ5 2229 aaKnown RBP1.94□□□□□ -2.1
PTPN12-202ENST00000407343 C9JCJ5 164 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 J3QQQ9 107 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 BHLHE40O14503 412 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 NPYP01303 97 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 S100A6P06703 90 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 GABRA2P47869 451 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 RPL26P61254 145 aaKnown RBP1.94□□□□□ -2.1
PTPN12-202ENST00000407343 COTL1Q14019 142 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 PABPC1L2AQ5JQF8 200 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 TMEM251Q8N6I4 163 aa1.94□□□□□ -2.1
PTPN12-202ENST00000407343 SPANXB1Q9NS25 103 aaPredicted RBP1.94□□□□□ -2.1
PTPN12-202ENST00000407343 RPL26L1Q9UNX3 145 aaKnown RBP1.94□□□□□ -2.1
PTPN12-202ENST00000407343 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 C5orf49A4QMS7 147 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 GOLGA8KD6RF30 607 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 GOLGA8MH3BSY2 632 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 NIPSNAP2O75323 286 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 BPGMP07738 259 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 EMP2P54851 167 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 TBPL1P62380 186 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 BTN3A2P78410 334 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 HOXC5Q00444 222 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 TMEM156Q8N614 296 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 DDI1Q8WTU0 396 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 EEF1AKMT1Q8WVE0 214 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 KCTD7Q96MP8 289 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 DHRS9Q9BPW9 319 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 TMEM222Q9H0R3 208 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 HHLA3Q9XRX5 114 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 KIAA2026Q5HYC2 2103 aa1.93□□□□□ -2.1
PTPN12-202ENST00000407343 SIPA1L1O43166 1804 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 RFPL4AA6NLU0 287 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 RFPL4AL1F8VTS6 287 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 NEFHP12036 1026 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 IDH3GP51553 393 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-202ENST00000407343 FKBP1AP62942 108 aaKnown RBP1.92□□□□□ -2.1
PTPN12-202ENST00000407343 UAP1Q16222 522 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-202ENST00000407343 PLPPR5Q32ZL2 321 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 N4BP2L1Q5TBK1 243 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-202ENST00000407343 NAA40Q86UY6 237 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 OR5J2Q8NH18 312 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 NMNAT3Q96T66 252 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 CCDC94Q9BW85 323 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-202ENST00000407343 HES4Q9HCC6 221 aa1.92□□□□□ -2.1
PTPN12-202ENST00000407343 TRAV41A0A0B4J266 112 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 A8MUN3 132 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 HLA-DQB2P05538 268 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 CD40LGP29965 261 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 RPL27AP46776 148 aaKnown RBP1.91□□□□□ -2.1
PTPN12-202ENST00000407343 RAP1GDS1P52306 607 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 MYL6P60660 151 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 UBE2IP63279 158 aaKnown RBP1.91□□□□□ -2.1
PTPN12-202ENST00000407343 TPM4P67936 248 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 OR10K2Q6IF99 312 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 LHFPL5Q8TAF8 219 aa1.91□□□□□ -2.1
PTPN12-202ENST00000407343 RBM7Q9Y580 266 aaKnown RBP1.91□□□□□ -2.1
PTPN12-202ENST00000407343 APOMO95445 188 aa1.9□□□□□ -2.11
PTPN12-202ENST00000407343 REG1AP05451 166 aa1.9□□□□□ -2.11
PTPN12-202ENST00000407343 TPM3P06753 285 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms