RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ZNF835Q9Y2P0 537 aa4.01□□□□□ -1.77
PCDH11X-207ENST00000406881 ARID1AO14497 2285 aa4.01□□□□□ -1.77
PCDH11X-207ENST00000406881 MUC6Q6W4X9 2439 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 TRAV24A0A0B4J272 114 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 KBTBD11-OT1A0A1B0GTJ5 212 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 M0QZ24 198 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 F2RL2O00254 374 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 RBFOX2O43251 390 aaKnown RBP eCLIP4□□□□□ -1.77
PCDH11X-207ENST00000406881 HSPB1P04792 205 aaKnown RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 LIPFP07098 398 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 DANCRP0C864 163 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 FOXG1P55316 489 aaPredicted RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 DLK1P80370 383 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 TBR1Q16650 682 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 C3orf36Q3SXR2 165 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4C13Q8NGP0 309 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 C18orf12Q96KH6 178 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 P2RX4Q99571 388 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 GINS3Q9BRX5 216 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 BARX1Q9HBU1 254 aaPredicted RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 TCF19Q9Y242 345 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 SLC25A15Q9Y619 301 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 LINC00312Q9Y6C7 94 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 GPR179Q6PRD1 2367 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 TRAV14DV4A0A0A6YYC5 116 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 C10orf142B7Z368 130 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 C11orf94C9JXX5 98 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 S1PR2O95136 353 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 NAPSAO96009 420 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM87AP0C7U9 286 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 BCL2P10415 239 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 NBL1P41271 181 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 UBE2L3P68036 154 aaKnown RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 BSPH1Q075Z2 132 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 LY6G6FQ5SQ64 297 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM78BQ5VT40 261 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 MYPOPQ86VE0 399 aaPredicted RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 PLPPR1Q8TBJ4 325 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 GRAMD2BQ96HH9 432 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4C12Q96R67 309 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 C19orf24Q9BVV8 132 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 CLEC7AQ9BXN2 247 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 ASCL3Q9NQ33 180 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 PPIAL4CA0A0B4J2A2 164 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 A0A1W2PPE3 182 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM74A7A6NL05 159 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 SRRM5B3KS81 715 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 H0YL77 283 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 PPIAL4GP0DN37 164 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 SPP1P10451 314 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 HTR1DP28221 377 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 SSTR5P35346 364 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 GNG4P50150 75 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 SNRPEP62304 92 aaKnown RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 MMDQ15546 238 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 RNF151Q2KHN1 245 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 C2orf68Q2NKX9 166 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 AWAT1Q58HT5 328 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 CLEC2AQ6UVW9 174 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 RTN4RL2Q86UN3 420 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 ABHD12Q8N2K0 398 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 OR13A1Q8NGR1 328 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 OR5B3Q8NH48 314 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 Q8WTZ3 238 aa4□□□□□ -1.77
PCDH11X-207ENST00000406881 KIF26AQ9ULI4 1882 aaPredicted RBP4□□□□□ -1.77
PCDH11X-207ENST00000406881 IGKV1-27A0A075B6S5 117 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 A0A1W2PPQ1 181 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF320A2RRD8 509 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 C7orf77A4D0Y5 90 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 RNF222A6NCQ9 220 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 G3V3Q6 166 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ACAA1P09110 424 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FGF8P55075 233 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ERVFC1-1P60608 527 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 SRSF4Q08170 494 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 PDPNQ86YL7 162 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 TEX29Q8N6K0 151 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF524Q96C55 264 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 WDR61Q9GZS3 305 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 LPAR2Q9HBW0 351 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 COA4Q9NYJ1 87 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 MSRB2Q9Y3D2 182 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 LRRK1Q38SD2 2015 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM90A9PA6NNJ1 464 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 CEACAM18A8MTB9 384 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 GNG7O60262 68 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 SLC25A5P05141 298 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 SMIM6P0DI80 62 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 GALR1P47211 349 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FOXF2Q12947 444 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 C10orf113Q5VZT2 155 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF324BQ6AW86 544 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4X1Q8NH49 305 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM210BQ96KR6 192 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 MRPL37Q9BZE1 423 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 ANAPC10Q9UM13 185 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 PXMP4Q9Y6I8 212 aa3.99□□□□□ -1.77
PCDH11X-207ENST00000406881 DOCK9Q9BZ29 2069 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms