RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 OR11H7Q8NGC8 314 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 UBALD1Q8TB05 177 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 SECTM1Q8WVN6 248 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 CAPSLQ8WWF8 208 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 SLC2A9Q9NRM0 540 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 PITPNC1Q9UKF7 332 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 GAB2Q9UQC2 676 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 KCNIP3Q9Y2W7 256 aa13.23□□□□□ -0.29
CGREF1-205ENST00000404694 IGKV1D-13A0A0B4J2D9 117 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 C9orf170A2RU37 121 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 CRYM-AS1A6NIL9 109 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 TOR1AO14656 332 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 DUS4LO95620 317 aaKnown RBP13.22□□□□□ -0.29
CGREF1-205ENST00000404694 IGKV1-13P0DP09 117 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 AKR1C4P17516 323 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 PPP1CCP36873 323 aaKnown RBP13.22□□□□□ -0.29
CGREF1-205ENST00000404694 PIGPP57054 158 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 ZFP69Q49AA0 526 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 ZNF645Q8N7E2 425 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 OR52B4Q8NGK2 314 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 MGAT4CQ9UBM8 478 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 SIGLEC9Q9Y336 463 aa13.22□□□□□ -0.29
CGREF1-205ENST00000404694 A0A0B4J2A0 478 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 LEUTXA8MZ59 168 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 BUB1B-PAK6H3BSN5 160 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 OR8U9P0C7N5 309 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 PRRX1P54821 245 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 PPP1R1AQ13522 171 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 GNMTQ14749 295 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 LTC4SQ16873 150 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.21□□□□□ -0.29
CGREF1-205ENST00000404694 ADAD2Q8NCV1 583 aaKnown RBP13.21□□□□□ -0.29
CGREF1-205ENST00000404694 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 OR9G1Q8NH87 305 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 MITD1Q8WV92 249 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 RTN4IP1Q8WWV3 396 aaPredicted RBP13.21□□□□□ -0.29
CGREF1-205ENST00000404694 LEAP2Q969E1 77 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 TMEM230Q96A57 120 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 GALNT14Q96FL9 552 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 PHB2Q99623 299 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 ZNF436Q9C0F3 470 aaPredicted RBP13.21□□□□□ -0.29
CGREF1-205ENST00000404694 SHPKQ9UHJ6 478 aa13.21□□□□□ -0.29
CGREF1-205ENST00000404694 IGHV3-43A0A0B4J1X8 118 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 TEX13DA0A0J9YY54 714 aaPredicted RBP13.2□□□□□ -0.3
CGREF1-205ENST00000404694 LY6LH3BQJ8 138 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 MPPED1O15442 326 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 SFT2D2O95562 160 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 IGHV3-7P01780 117 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
CGREF1-205ENST00000404694 IGHV3-43DP0DP04 118 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 VAMP1P23763 118 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 CEACAM3P40198 252 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 TPTE2P1Q5T6R2 138 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 ZNF818PQ6ZRF7 136 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 ZNF439Q8NDP4 499 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 FYTTD1Q96QD9 318 aaKnown RBP13.2□□□□□ -0.3
CGREF1-205ENST00000404694 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 ABHD14AQ9BUJ0 271 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 NAA60Q9H7X0 242 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 CCL28Q9NRJ3 127 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 VWFP04275 2813 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 CMYA5Q8N3K9 4069 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 J3QR06 171 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 OR2A4O95047 310 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 C1QBP02746 253 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 HLA-GP17693 338 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 CXCL3P19876 107 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 PI3P19957 117 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 ARHGDIBP52566 201 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 RAP2BP61225 183 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 LIN54Q6MZP7 749 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 SLC25A48Q6ZT89 311 aaKnown RBP13.2□□□□□ -0.3
CGREF1-205ENST00000404694 LINC00311Q8N616 119 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 TCTEX1D1Q8N7M0 179 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 COQ8AQ8NI60 647 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 OR2A7Q96R45 310 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 ZNF702PQ9H963 129 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 PIPOXQ9P0Z9 390 aa13.2□□□□□ -0.3
CGREF1-205ENST00000404694 AMMECR1Q9Y4X0 333 aaPredicted RBP13.2□□□□□ -0.3
CGREF1-205ENST00000404694 HSD17B6O14756 317 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 TIMM23O14925 209 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 RAB29O14966 203 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 CD24P25063 80 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 BRS3P32247 399 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 GNG10P50151 68 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
CGREF1-205ENST00000404694 SRPXP78539 464 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 PHLDA2Q53GA4 152 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 NOXA1Q86UR1 476 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 Q8N2B8 174 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 DRAM1Q8N682 238 aa13.19□□□□□ -0.3
CGREF1-205ENST00000404694 HSD17B10Q99714 261 aaKnown RBP13.19□□□□□ -0.3
CGREF1-205ENST00000404694 PARP12Q9H0J9 701 aaKnown RBP13.19□□□□□ -0.3
CGREF1-205ENST00000404694 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms