RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CLDN12P56749 244 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 RHOGP84095 191 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 EXOSC2Q13868 293 aaKnown RBP8.99□□□□□ -0.97
LINC00544-201ENST00000400540 TNXAQ16473 311 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 TATDN3Q17R31 274 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 TMEM177Q53S58 311 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 IGSF11Q5DX21 431 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 C8orf59Q8N0T1 100 aaPredicted RBP8.99□□□□□ -0.97
LINC00544-201ENST00000400540 MS4A15Q8N5U1 240 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.99□□□□□ -0.97
LINC00544-201ENST00000400540 FBLIM1Q8WUP2 373 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 SRSF12Q8WXF0 261 aaKnown RBP8.99□□□□□ -0.97
LINC00544-201ENST00000400540 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 SNAPC3Q92966 411 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 TMEM68Q96MH6 324 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 KRTAP17-1Q9BYP8 105 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 SRD5A3Q9H8P0 318 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 PLGRKTQ9HBL7 147 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 PLCXD1Q9NUJ7 323 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 PEMTQ9UBM1 199 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 LSM2Q9Y333 95 aaKnown RBP8.99□□□□□ -0.97
LINC00544-201ENST00000400540 VPS13DQ5THJ4 4388 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 A0A0B4J203 849 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 PPP5D1E7EU14 171 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 SLC17A2O00624 439 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 FABP7O15540 132 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 OR9G9P0C7N8 305 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 GSTT2P0CG29 244 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 GSTT2BP0CG30 244 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 TAGLNQ01995 201 aaKnown RBP8.98□□□□□ -0.97
LINC00544-201ENST00000400540 RNLSQ5VYX0 342 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 C19orf35Q6ZS72 473 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 OR4A4PQ8NGN8 299 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 OR2K2Q8NGT1 345 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 ACOT12Q8WYK0 555 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 TMEM203Q969S6 136 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 MND1Q9BWT6 205 aa8.98□□□□□ -0.97
LINC00544-201ENST00000400540 AK6Q9Y3D8 172 aaKnown RBP8.98□□□□□ -0.97
LINC00544-201ENST00000400540 LINC00473A8K010 186 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 OR11H12B2RN74 326 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 MPPED1O15442 326 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 CRYZL1O95825 349 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 HLA-AP01891 365 aaKnown RBP8.97□□□□□ -0.97
LINC00544-201ENST00000400540 CDK1P06493 297 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 RAB11BQ15907 218 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 PRSS8Q16651 343 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 GUCA2BQ16661 112 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 DEFB114Q30KQ6 69 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 C10orf55Q5SWW7 151 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 LIPKQ5VXJ0 399 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 TMEM91Q6ZNR0 172 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 LAX1Q8IWV1 398 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 PACRGLQ8N7B6 248 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 DYNLRB2Q8TF09 96 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 CACNG8Q8WXS5 425 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 LINC00476Q8WZB0 136 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 DDB2Q92466 427 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
LINC00544-201ENST00000400540 CABLES2Q9BTV7 478 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 SLC2A8Q9NY64 477 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 KCNK7Q9Y2U2 307 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 DMRT1Q9Y5R6 373 aa8.97□□□□□ -0.97
LINC00544-201ENST00000400540 DNAH6Q9C0G6 4158 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 TRBV6-7A0A0A0MS04 114 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.96□□□□□ -0.98
LINC00544-201ENST00000400540 TRBV9A0A0B4J1U6 114 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 C2orf70A6NJV1 201 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 FAM223BA6NKX1 122 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 AIREO43918 545 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 OR2J3O76001 311 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 FCGR3AP08637 254 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 SERPINB10P48595 397 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 UBE2KP61086 200 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 RPS25P62851 125 aaKnown RBP8.96□□□□□ -0.98
LINC00544-201ENST00000400540 ATP5G2Q06055 141 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 CBX3Q13185 183 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 SPHARQ15513 63 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 MED22Q15528 200 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 RTL8BQ17RB0 113 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 VMA21Q3ZAQ7 101 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 FAM223AQ8IWN6 122 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 TEX45Q8NA69 505 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 OR10J5Q8NHC4 309 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 ZNF430Q9H8G1 570 aaPredicted RBP8.96□□□□□ -0.98
LINC00544-201ENST00000400540 ZC4H2Q9NQZ6 224 aa8.96□□□□□ -0.98
LINC00544-201ENST00000400540 TMEM272A0A1B0GTI8 110 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 PTGES3LE9PB15 166 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 IGHV3-23P01764 117 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 SAA1P0DJI8 122 aaPredicted RBP8.95□□□□□ -0.98
LINC00544-201ENST00000400540 FOLR2P14207 255 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 DUTP33316 252 aaKnown RBP8.95□□□□□ -0.98
LINC00544-201ENST00000400540 C15orf32Q32M92 178 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 C2orf76Q3KRA6 126 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 OR56B1Q8NGI3 324 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 UFD1Q92890 307 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 FAM3DQ96BQ1 224 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 RBM7Q9Y580 266 aaKnown RBP8.95□□□□□ -0.98
LINC00544-201ENST00000400540 S4R3C0 116 aa8.95□□□□□ -0.98
LINC00544-201ENST00000400540 A0A075B6Q4 140 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms