RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MAP1LC3CQ9BXW4 147 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 CBY1Q9Y3M2 126 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 PAFAH1B2P68402 229 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 PATJQ8NI35 1801 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 EP300Q09472 2414 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-204ENST00000400337 MFAP2P55001 183 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 UCP3P55916 312 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 FAM27E3Q08E93 113 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 SDK2Q58EX2 2172 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 LCTP09848 1927 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 M0R143 59 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 OR2A4O95047 310 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 OR2A7Q96R45 310 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 TLNRD1Q9H1K6 362 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 GP6Q9HCN6 339 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 ERVH48-1M5A8F1 160 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 PUSL1Q8N0Z8 303 aaKnown RBP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 TP53RKQ96S44 253 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 SH3BGRL3Q9H299 93 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 IGHV1-69-2A0A0G2JMI3 117 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 COX6B1P14854 86 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 ZNF708P17019 499 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 LINC01560Q8TB33 94 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 CECR9P0C854 216 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 OR9G1Q8NH87 305 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 ZNF430Q9H8G1 570 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 ZNF729A6NN14 1252 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 HSPB1P04792 205 aaKnown RBP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 PF4V1P10720 104 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 ZNF383Q8NA42 475 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 RPL7P18124 248 aaKnown RBP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 RPS11P62280 158 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 HOXA4Q00056 320 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-204ENST00000400337 TIMM23BQ5SRD1 257 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 UNQ5815/PRO19632Q6UWF5 114 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 POC1AQ8NBT0 407 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 MIOXQ9UGB7 285 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 TCF19Q9Y242 345 aa15.5■□□□□ 0.07
COL18A1-204ENST00000400337 RALGAPA2Q2PPJ7 1873 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 ACSF3Q4G176 576 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-204ENST00000400337 WDFY1Q8IWB7 410 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 MUC15Q8N387 334 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 LSM10Q969L4 123 aaKnown RBP15.49■□□□□ 0.07
COL18A1-204ENST00000400337 IGLV3-12A0A075B6K2 115 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 ID4P47928 161 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 PPOXP50336 477 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 EIF4E3Q8N5X7 224 aaKnown RBP15.49■□□□□ 0.07
COL18A1-204ENST00000400337 ANKRD36A6QL64 1941 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 GLRXP35754 106 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 GFRA1P56159 465 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 IFITM2Q01629 132 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 RAB24Q969Q5 203 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 REG1AP05451 166 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 ID1P41134 155 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 SPANXN1Q5VSR9 72 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 POM121Q96HA1 1249 aa15.49■□□□□ 0.07
COL18A1-204ENST00000400337 SLC35E4Q6ICL7 350 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 C19orf48Q6RUI8 117 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 TMEM105Q8N8V8 129 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 PGPA6NDG6 321 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 TNFSF10P50591 281 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 MRPL37Q9BZE1 423 aaKnown RBP15.48■□□□□ 0.07
COL18A1-204ENST00000400337 PQLC2Q6ZP29 291 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 OR4C13Q8NGP0 309 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 RBM14Q96PK6 669 aaKnown RBP15.48■□□□□ 0.07
COL18A1-204ENST00000400337 QTRT1Q9BXR0 403 aaKnown RBP15.48■□□□□ 0.07
COL18A1-204ENST00000400337 NEUROG3Q9Y4Z2 214 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 EFEMP2O95967 443 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 TFPI2P48307 235 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 MEGF10Q96KG7 1140 aa15.48■□□□□ 0.07
COL18A1-204ENST00000400337 RNF224P0DH78 156 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 FAM3BP58499 235 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-204ENST00000400337 RARRES2Q99969 163 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 ELOVL5Q9NYP7 299 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 DCAF16Q9NXF7 216 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 H0YL77 283 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 KBTBD11O94819 623 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 CHODLQ9H9P2 273 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 TMEM186Q96B77 213 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 TM2D1Q9BX74 207 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 OTOFQ9HC10 1997 aa15.47■□□□□ 0.07
COL18A1-204ENST00000400337 LOC105371242A0A075B767 164 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 FAM209AQ5JX71 171 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 IBA57Q5T440 356 aaKnown RBP15.46■□□□□ 0.07
COL18A1-204ENST00000400337 TXNDC17Q9BRA2 123 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 RTN4RQ9BZR6 473 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 A8MWL6 223 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 B9A039 149 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 FHITP49789 147 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 RPL39P5Q59GN2 51 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 DHRS11Q6UWP2 260 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 ACP7Q6ZNF0 438 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 BPIFA4PQ86YQ2 179 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 OR8A1Q8NGG7 326 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 SMIM8Q96KF7 97 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 NUBP1P53384 320 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 PNKDQ8N490 385 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 CLEC7AQ9BXN2 247 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 RALYQ9UKM9 306 aaKnown RBP15.46■□□□□ 0.07
COL18A1-204ENST00000400337 MTCL1Q9Y4B5 1905 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms