RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TRAV17A0A0B4J275 112 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 ISXQ2M1V0 245 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 OR13A1Q8NGR1 328 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 SRSF12Q8WXF0 261 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 GPR179Q6PRD1 2367 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 DEFB108AA8MXU0 73 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 EML2O95834 649 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 OR11H4Q8NGC9 324 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 RPUSD1Q9UJJ7 312 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 CEACAM5P06731 702 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 IER5LQ5T953 404 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 PLEKHB2Q96CS7 222 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 RETNQ9HD89 108 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 PXDNQ92626 1479 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 EDIL3O43854 480 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 CLEC2LP0C7M8 214 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 NPPBP16860 134 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 KRTCAP3Q53RY4 240 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 ZCCHC11Q5TAX3 1644 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 PSCAO43653 123 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 FOXA1P55317 472 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 EEF1AKMT3Q96AZ1 226 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 IGHV1-69-2A0A0G2JMI3 117 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 NDUFB4O95168 129 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 MYOD1P15172 320 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 IFITM3Q01628 133 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 TBR1Q16650 682 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 PTGESO14684 152 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 MARCH3Q86UD3 253 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 SARGQ9BW04 601 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 NEUROG3Q9Y4Z2 214 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 Q71RC1 249 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 TMEM186Q96B77 213 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 DUX3Q96PT4 197 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 ARFGEF2Q9Y6D5 1785 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 TRGV2A0A075B6R0 118 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 SPRY1O43609 319 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 CTAG2O75638 210 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 SHISA5Q8N114 240 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 OTOSQ8NHW6 89 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 UMODP07911 640 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 FABP5Q01469 135 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 KIRREL2Q6UWL6 708 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 CIARTQ8N365 385 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 GTSF1LQ9H1H1 148 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A1W2PRS3 328 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 KNCNA6PVL3 124 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 H3BQ85 93 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 EREGO14944 169 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 OR51G1Q8NGK1 321 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 TSC2P49815 1807 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 VKORC1Q9BQB6 163 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 ATP5G2Q06055 141 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 RTP2Q5QGT7 225 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 CCDC168Q8NDH2 2452 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 PREX1Q8TCU6 1659 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 ARPC1AQ92747 370 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 SPACA5Q96QH8 159 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 COL11A1P12107 1806 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 TMEM252Q8N6L7 170 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 NRG4Q8WWG1 115 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 IL36RNQ9UBH0 155 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 SPINK9Q5DT21 86 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 C8orf31Q8N9H6 132 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 hCG_38984A0A1B0GV85 526 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM90A26D6RGX4 464 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM182BQ5T319 152 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 MMP23AO75900 390 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 HOXB3P14651 431 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 MMD2Q8IY49 270 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 OR11H7Q8NGC8 314 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 MMP25Q9NPA2 562 aa7.48□□□□□ -1.21
CACNA1C-220ENST00000399655 MBD5Q9P267 1494 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 TARM1B6A8C7 271 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 TMEM50BP56557 158 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 NHLRC3Q5JS37 347 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 SLC39A5Q6ZMH5 540 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 RNF39Q9H2S5 420 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 TMEM74BQ9NUR3 256 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 DCCP43146 1447 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 POLR2GP62487 172 aaKnown RBP eCLIP7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 ST6GAL2Q96JF0 529 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 EMC6Q9BV81 110 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 HAPLN2Q9GZV7 340 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 SLIT2O94813 1529 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A0G2JLM5 398 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 C21orf140B9A014 251 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 C14orf144Q96I85 54 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 WDR54Q9H977 334 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 SLC50A1Q9BRV3 221 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 SF3B6Q9Y3B4 125 aaKnown RBP7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 LRP12Q9Y561 859 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM90A18PA6NE21 464 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM90A16PA6NEW6 464 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM90A9PA6NNJ1 464 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM90A5PA8MXJ8 464 aa7.47□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM90A15PP0C7V4 464 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms