RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ALG1L2C9J202 215 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 FCGR3BO75015 233 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 CD38P28907 300 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 TSPOP30536 169 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 SPANXN1Q5VSR9 72 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 DLX4Q92988 240 aaPredicted RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 ZNFX1Q9P2E3 1918 aaKnown RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 RGPD3A6NKT7 1758 aaPredicted RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 RGPD4Q7Z3J3 1758 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 TRBV20-1A0A075B6N2 111 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 GDF1P27539 372 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 C5orf47Q569G3 176 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 SPAG17Q6Q759 2223 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 A0A0U1RQV5 110 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 SRP19P09132 144 aaKnown RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 CRYBA4P53673 196 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 PSG6Q00889 435 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 OR8B8Q15620 311 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 CYP2G1PQ6ZSU1 146 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 APOBEC4Q8WW27 367 aaKnown RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 OCIAD1Q9NX40 245 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 KLHDC2Q9Y2U9 406 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1B0GU03 582 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 J3KT08 172 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 CA11O75493 328 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 UPK3AO75631 287 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 IFI6P09912 130 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 TDGF1P13385 188 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 EVI2AP22794 236 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 IGFBP7Q16270 282 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 C1orf100Q5SVJ3 147 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 KISS1RQ969F8 398 aaPredicted RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 ABHD17AQ96GS6 310 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 VSTM2LQ96N03 204 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 REG4Q9BYZ8 158 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 ANKRD10Q9NXR5 420 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 TRAV9-1A0A075B6T8 112 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 DHHO43323 396 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 CFIP05156 583 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 GNG3P63215 75 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 HOXA4Q00056 320 aaPredicted RBP8.3□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF56Q15929 161 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 OR10X1Q8NGY0 326 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 MS4A5Q9H3V2 200 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 CACNA1CQ13936 2221 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 FOXF1Q12946 379 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 SPSB4Q96A44 273 aa8.3□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1W2PQD3 144 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 SCRG1O75711 98 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CXCL10P02778 98 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CISD3P0C7P0 127 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 GZMBP10144 247 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 ATXN8Q156A1 80 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 DMRTC1Q5HYR2 192 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 TRAV26-1A0A087WT03 109 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 PDCD6O75340 191 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 HOXC4P09017 264 aaPredicted RBP8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CEACAM6P40199 344 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 LHX2P50458 406 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 RTP5Q14D33 572 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 C18orf15Q96N68 181 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 LRRC61Q9BV99 259 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 SH3BGRL3Q9H299 93 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 MUC21A0A0G2JKD1 596 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 MUC21A0A140T8X8 626 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 METTL12A8MUP2 240 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CACNG7P62955 275 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 MUC21Q5SSG8 566 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 C1orf174Q8IYL3 243 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CCL4L1Q8NHW4 92 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 GDF15Q99988 308 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 STRADBQ9C0K7 418 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 SYNGR1O43759 233 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 IL2RAP01589 272 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 CDAP32320 146 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 ZXDCQ2QGD7 858 aaPredicted RBP8.29□□□□□ -1.08
SMAD9-203ENST00000399275 C10orf113Q5VZT2 155 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 TEPPQ6URK8 271 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 ZDHHC23Q8IYP9 409 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF441Q8N8Z8 693 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 MUCL1Q96DR8 90 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 SDF2L1Q9HCN8 221 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 FGF21Q9NSA1 209 aa8.29□□□□□ -1.08
SMAD9-203ENST00000399275 A0A0J9YW62 118 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 APOHP02749 345 aaPredicted RBP8.28□□□□□ -1.08
SMAD9-203ENST00000399275 OR9G9P0C7N8 305 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 LYZP61626 148 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 CEACAM21Q3KPI0 293 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 SMIM8Q96KF7 97 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 BRWD3Q6RI45 1802 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF236Q9UL36 1845 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 BGLAPP02818 100 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms