RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 GCHFRP30047 84 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 C1QL2Q7Z5L3 287 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 WDR31Q8NA23 367 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 HEXA-AS1Q9H8Q6 139 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 NYNRINQ9P2P1 1898 aaKnown RBP7.41□□□□□ -1.22
CTNND1-205ENST00000399050 GREB1LQ9C091 1923 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-205ENST00000399050 CTSBP07858 339 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 AREGP15514 252 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 HSPB7Q9UBY9 170 aa7.41□□□□□ -1.22
CTNND1-205ENST00000399050 POLR2AP24928 1970 aaKnown RBP7.4□□□□□ -1.22
CTNND1-205ENST00000399050 LCN2P80188 198 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 ASCL5Q7RTU5 278 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 SAXO1Q8IYX7 474 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 KCNS1Q96KK3 526 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 CITED2Q99967 270 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-205ENST00000399050 RTN4RQ9BZR6 473 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 A0A1W2PQF6 199 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 K7N7A8 449 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 ICAM4Q14773 271 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 ZNF124Q15973 351 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 KCNMB1Q16558 191 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 RBPMS2Q6ZRY4 209 aaKnown RBP7.4□□□□□ -1.22
CTNND1-205ENST00000399050 UBALD2Q8IYN6 164 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 ZNF784Q8NCA9 323 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-205ENST00000399050 OR8B2Q96RD0 313 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 NDUFAF3Q9BU61 184 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 SSBP3Q9BWW4 388 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-205ENST00000399050 REG4Q9BYZ8 158 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 ATG2BQ96BY7 2078 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 MARCH11A6NNE9 402 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 SLC17A3O00476 420 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 FGF16O43320 207 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 CELA2AP08217 269 aa7.4□□□□□ -1.22
CTNND1-205ENST00000399050 PDCD11Q14690 1871 aaKnown RBP7.4□□□□□ -1.22
CTNND1-205ENST00000399050 C8orf88P0DMB2 117 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 LRRC75BQ2VPJ9 315 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 ST6GALNAC3Q8NDV1 305 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 ALKBH7Q9BT30 221 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-205ENST00000399050 SLC25A10Q9UBX3 287 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-205ENST00000399050 MKRN2OSH3BPM6 223 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 SMIM13P0DJ93 91 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 ARL6IP6Q8N6S5 226 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 ST6GALNAC6Q969X2 333 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 TM2D1Q9BX74 207 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 NPCDR1Q9BY65 106 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 CLEC1BQ9P126 229 aa7.4□□□□□ -1.23
CTNND1-205ENST00000399050 MTCL1Q9Y4B5 1905 aaKnown RBP7.4□□□□□ -1.23
CTNND1-205ENST00000399050 VKORC1L1Q8N0U8 176 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ABHD12Q8N2K0 398 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 TMEM70Q9BUB7 260 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HES7Q9BYE0 225 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ZNF430Q9H8G1 570 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 WDR54Q9H977 334 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 RALGAPA2Q2PPJ7 1873 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 PSME4Q14997 1843 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 TMEM229AB2RXF0 380 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 IGHV4-34P06331 123 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 UCP2P55851 309 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 TFF3Q07654 80 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 CYP2G1PQ6ZSU1 146 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ZDHHC16Q969W1 377 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ZNF501Q96CX3 271 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 MAP1LC3AQ9H492 121 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ASCC3Q8N3C0 2202 aaKnown RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 C7orf71A4D174 169 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 C17orf51A8MQB3 221 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 J3QRE1 110 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ZIC3O60481 467 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 SGK494Q96LW2 274 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BKO60814 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BJP06899 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BOP23527 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BBP33778 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BDP58876 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BCP62807 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST2H2BEQ16778 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 CALHM1Q8IU99 346 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 DRAM1Q8N682 238 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 SRSF12Q8WXF0 261 aaKnown RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BHQ93079 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 TMEM54Q969K7 222 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 TTTY12Q9BZ98 90 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 IGHV1-45A0A0A0MS14 117 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 MGST3O14880 152 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 RSPO4Q2I0M5 234 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-205ENST00000399050 NIT1Q86X76 327 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 TMEM170AQ8WVE7 144 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 C18orf12Q96KH6 178 aa7.39□□□□□ -1.23
CTNND1-205ENST00000399050 PKIBQ9C010 78 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms