RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PAM16Q9Y3D7 125 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 B9A039 149 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 HYAL3O43820 417 aaPredicted RBP7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 NUDT3O95989 172 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ARL14EPLP0DKL9 152 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 PRSS53Q2L4Q9 553 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 PUSL1Q8N0Z8 303 aaKnown RBP7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ITLN1Q8WWA0 313 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 GPR82Q96P67 336 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 CLEC7AQ9BXN2 247 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 TAF1LQ8IZX4 1826 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 LOC285556D6RIA3 1793 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 GAGE10A6NGK3 116 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 NPIPB11E5RHQ5 1161 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 COX6B1P14854 86 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 NMUP48645 174 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 SNAI3Q3KNW1 292 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 TREM2Q9NZC2 230 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 PDLIM4P50479 330 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF137PP52743 207 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 CX3CL1P78423 397 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 TMEM183AQ8IXX5 376 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 IGHV3-13P01766 116 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 IGHV3-7P01780 117 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 CD40P25942 277 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 HBBP68871 147 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 RRN3P1Q2M238 152 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 LINC01590Q5TEZ4 76 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 ANKRD31Q8N7Z5 1873 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 GATAD1Q8WUU5 269 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF488Q96MN9 340 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 PGPA6NDG6 321 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 FAM90A9PA6NNJ1 464 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 TRGC2P03986 189 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 MPZP25189 248 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 ASPHD2Q6ICH7 369 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 CYP2G1PQ6ZSU1 146 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 FGF11Q92914 225 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 MEGF10Q96KG7 1140 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 PCGF1Q9BSM1 259 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 SRXN1Q9BYN0 137 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF71Q9NQZ8 489 aaPredicted RBP7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 SCN1AP35498 2009 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 RBFOX2O43251 390 aaKnown RBP eCLIP7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 OSR1Q8TAX0 266 aaPredicted RBP7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 SOSTQ9BQB4 213 aa7.16□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF646O15015 1829 aaPredicted RBP7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 TGIF2-C20orf24A0A0A6YYL0 155 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 GCHFRP30047 84 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 RUNX1Q01196 453 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 TMEM177Q53S58 311 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF818PQ6ZRF7 136 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 RNF115Q9Y4L5 304 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 PIN1P1O15428 100 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 LIPFP07098 398 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 SOD3P08294 240 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 SRSF5Q13243 272 aaKnown RBP7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 SMUG1Q53HV7 270 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 KLF14Q8TD94 323 aaPredicted RBP7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 FSCN3Q9NQT6 498 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 RALYQ9UKM9 306 aaKnown RBP7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 C19orf67A6NJJ6 358 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 CRXO43186 299 aaPredicted RBP7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 SRSF7Q16629 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 MIC13Q5XKP0 118 aa7.15□□□□□ -1.26
SPTLC3-201ENST00000399002 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 A0A1W2PQM1 296 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 H7C1H1 209 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 IGKV3-11P04433 115 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 MEF2CQ06413 473 aaPredicted RBP7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 GUCD1Q96NT3 240 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 NRTNQ99748 197 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 MOB4Q9Y3A3 225 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 LOC105371242A0A075B767 164 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 PPIAL4CA0A0B4J2A2 164 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 PPIAL4GP0DN37 164 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 DDTP30046 118 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 UNQ5815/PRO19632Q6UWF5 114 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 TCF23Q7RTU1 214 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 PRR7Q8TB68 274 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 RNASEH2CQ8TDP1 164 aaKnown RBP7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 MS4A3Q96HJ5 214 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 IL36BQ9NZH7 164 aa7.15□□□□□ -1.27
SPTLC3-201ENST00000399002 SCN9AQ15858 1988 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 ZNF324O75467 553 aaPredicted RBP7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 FOXH1O75593 365 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 PAX1P15863 534 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 ZNF385CQ66K41 422 aaPredicted RBP7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 LINC00114Q6XXX2 140 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 PGLYRP4Q96LB8 373 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 AMELYQ99218 206 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 TCF19Q9Y242 345 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 SYNGR3O43761 229 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 IGLV3-19P01714 112 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 FTH1P19P0C7X4 201 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 STPG1Q5TH74 334 aa7.14□□□□□ -1.27
SPTLC3-201ENST00000399002 C19orf48Q6RUI8 117 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms