RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MTCP1P56278 107 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 SNRPNP63162 240 aaKnown RBP5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM200BQ69YZ2 307 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 DGAT2L6Q6ZPD8 337 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM19A5Q7Z5A7 132 aaPredicted RBP5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4X1Q8NH49 305 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNRF2Q8NHG8 242 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 MFSD8Q8NHS3 518 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 MOB1AQ9H8S9 216 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 GPR84Q9NQS5 396 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 UQCR10Q9UDW1 63 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 RAXQ9Y2V3 346 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 ZFHX3Q15911 3703 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 GVINP1Q7Z2Y8 2422 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 IGKV1D-42A0A075B6H8 117 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A1B0GTH9 108 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM272A0A1B0GTI8 110 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 MFNGO00587 321 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 ASAH2BP0C7U1 165 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A8P0DMV1 189 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A9P0DMV2 189 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC25A4P12235 298 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CTSEP14091 401 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 EFNB2P52799 333 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 C2orf68Q2NKX9 166 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 DEFB110Q30KQ9 67 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A2Q5DJT8 189 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 GLYATL3Q5SZD4 288 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 HLA-DQA1Q5Y7H0 255 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 C11orf87Q6NUJ2 197 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 RNF144BQ7Z419 303 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 OR10AC1Q8NH08 325 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 RNF128Q8TEB7 428 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 PP6455Q8WZ26 134 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC25A44Q96H78 314 aaPredicted RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 GNG12Q9UBI6 72 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 POLDIP2Q9Y2S7 368 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CHD8Q9HCK8 2581 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 ARID1BQ8NFD5 2236 aaPredicted RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 GPR179Q6PRD1 2367 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 MS4A18H0YCH9 400 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 M0QYG6 137 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 TPT1P13693 172 aaKnown RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF823P16415 610 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 NTF3P20783 257 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 OR1D4P47884 311 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CYCSP99999 105 aaKnown RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 TDRG1Q3Y452 100 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 GATAD1Q8WUU5 269 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 WNT2BQ93097 391 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 RAB39BQ96DA2 213 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 IP6K3Q96PC2 410 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 IDI2-AS1Q9NZ38 188 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 KALRNO60229 2985 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 MED19A0JLT2 244 aaPredicted RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 B4DEV8 164 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 C11orf98E9PRG8 122 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 H0Y8X5 98 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 IGLC1P0CG04 106 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 GP1BBP13224 206 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 RPL7P18124 248 aaKnown RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 EVI2AP22794 236 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC35B1P78383 322 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 ELOCQ15369 112 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF66Q6ZN08 573 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 OR5AP2Q8NGF4 316 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 OR51A4Q8NGJ6 313 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 PSMF1Q92530 271 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 ADTRPQ96IZ2 230 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CHST6Q9GZX3 395 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 CEP192Q8TEP8 1941 aa5.59□□□□□ -1.51
TM9SF4-202ENST00000398022 DCDC2BA2VCK2 349 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 TMEM150CB9EJG8 249 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 PGCP20142 388 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 RPS27P42677 84 aaKnown RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 COA6Q5JTJ3 125 aaKnown RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 C1orf189Q5VU69 101 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 TMEM92Q6UXU6 159 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 Q6ZT83 130 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 RASL11BQ9BPW5 248 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 CYSLTR1Q9Y271 337 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF705FA8MVS1 300 aaPredicted RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 E9PLN8 166 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 MOSP00540 346 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 APOA2P02652 100 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF705DP0CH99 300 aaPredicted RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF705BP0CI00 300 aaPredicted RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 FCARP24071 287 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 RPL27P61353 136 aaKnown RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 HIST1H3AP68431 136 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 IGLV3-21P80748 117 aaPredicted RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 STPG1Q5TH74 334 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 OTPQ5XKR4 325 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 ZDHHC22Q8N966 263 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 PPP1R1CQ8WVI7 109 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms