RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CCSO14618 274 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 SIX6O95475 246 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 SLC25A4P12235 298 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 HOXB4P17483 251 aaPredicted RBP15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 COX7A1P24310 79 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 BPIFB3P59826 476 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 IL15RAQ13261 267 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 ZNF383Q8NA42 475 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 THAP6Q8TBB0 222 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 OR10C1Q96KK4 312 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 GPHA2Q96T91 129 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 NABP2Q9BQ15 211 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 WASHC3Q9Y3C0 194 aa15.46■□□□□ 0.06
TSPAN4-204ENST00000397404 MARCH11A6NNE9 402 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 H0YJW9 148 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 RAMP3O60896 148 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 LGALS7P47929 136 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 EIF2B2P49770 351 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 UTF1Q5T230 341 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 TMEM65Q6PI78 240 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 TEX29Q8N6K0 151 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 VSTM2AQ8TAG5 236 aa15.45■□□□□ 0.06
TSPAN4-204ENST00000397404 NBPF19A0A087WUL8 3843 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 IGKV1-39P01597 117 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 IGKV1D-39P04432 117 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 BRWD1-AS2P59051 145 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 TMEM177Q53S58 311 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 TPTE2P1Q5T6R2 138 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 H2BFWTQ7Z2G1 175 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 LHX4Q969G2 390 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 FLYWCH2Q96CP2 140 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 R3HDM4Q96D70 268 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 MALSU1Q96EH3 234 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 TBX15Q96SF7 602 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 MRPL20Q9BYC9 149 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 PRR13Q9NZ81 148 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 AUP1Q9Y679 476 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 POLQO75417 2590 aa15.44■□□□□ 0.06
TSPAN4-204ENST00000397404 ST8SIA3O43173 380 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 S1PR2O95136 353 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 MPC2O95563 127 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 P0C879 139 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 CD300CQ08708 224 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 HCP5Q6MZN7 132 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 C11orf87Q6NUJ2 197 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 DRAXINQ8NBI3 349 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 OR4D5Q8NGN0 318 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 GSKIPQ9P0R6 139 aa15.43■□□□□ 0.06
TSPAN4-204ENST00000397404 IGHV1-3A0A0C4DH29 117 aa15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 RNASEK-C17orf49H0YIS7 233 aa15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 PITX3O75364 302 aa15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 LYL1P12980 280 aa15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 PVALBP20472 110 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 CD1BP29016 333 aa15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 NKX2-1P43699 371 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 HABP2Q14520 560 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 C1orf229Q6ZS94 237 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 OR4A5Q8NH83 315 aa15.42■□□□□ 0.06
TSPAN4-204ENST00000397404 H7C2Y5 167 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 MED6O75586 246 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 CRYZL1O95825 349 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 KRASP01116 189 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 IGKV1-5P01602 117 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 AARDQ4LEZ3 155 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 PRSS54Q6PEW0 395 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 FOXRED2Q8IWF2 684 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 DMBX1Q8NFW5 382 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 OR1S1Q8NH92 325 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 GPR146Q96CH1 333 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 Q96MF0 132 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 HIF1ANQ9NWT6 349 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 FKBP11Q9NYL4 201 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 POMT1Q9Y6A1 747 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 CREBBPQ92793 2442 aa15.41■□□□□ 0.06
TSPAN4-204ENST00000397404 MPTX1A8MV57 137 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 BOLA2-SMG1P6H3BVE0 249 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 NUP62P37198 522 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 ID3Q02535 119 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 OR2B11Q5JQS5 317 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 ZNF429Q86V71 674 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 RHOVQ96L33 236 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 BET1LQ9NYM9 111 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.4■□□□□ 0.063e-9■■■□□ 17.3
TSPAN4-204ENST00000397404 WNK2Q9Y3S1 2297 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 E5RGE8 158 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 RNF223E7ERA6 249 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 SHOXO15266 292 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 G6PCP35575 357 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 ZNF345Q14585 488 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 TMEM249Q2WGJ8 235 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 GPR157Q5UAW9 335 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 KRTAP1-3Q8IUG1 177 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 INO80EQ8NBZ0 244 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 OR52E5Q8NH55 327 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 TSNAXQ99598 290 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 CACNG5Q9UF02 275 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 NSG2Q9Y328 171 aa15.4■□□□□ 0.06
TSPAN4-204ENST00000397404 G3V3Q6 166 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 DEDDO75618 318 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms