RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SRMP19623 302 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 WNT4P56705 351 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 LINC00205P59089 165 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 SSBP2P81877 361 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-208ENST00000397204 QRFPP83859 136 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 PJVKQ0ZLH3 352 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 UNC119Q13432 240 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 RPEL1Q2QD12 228 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 LRRTM1Q86UE6 522 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 NANOGP1Q8N7R0 232 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 BVESQ8NE79 360 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 URM1Q9BTM9 101 aaKnown RBP6.63□□□□□ -1.35
CAPN3-208ENST00000397204 Q9N2K0 584 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 SLC35D1Q9NTN3 355 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 PLCXD1Q9NUJ7 323 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 OR1A1Q9P1Q5 309 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 HSF4Q9ULV5 492 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 A0A0A6YYD4 124 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 A0A0B4J203 849 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 MSGN1A6NI15 193 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 ZNF785A8K8V0 405 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 M0R1X1 148 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 SOCS1O15524 211 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 RRASP10301 218 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 SERPINB10P48595 397 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 TMEM50BP56557 158 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 CD81P60033 236 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 HLA-DRB3P79483 266 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 CBX3Q13185 183 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 DYRK1AQ13627 763 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 TMEM177Q53S58 311 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 FAM209BQ5JX69 171 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 DHRSXQ8N5I4 330 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 CYGBQ8WWM9 190 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 NEURL2Q9BR09 285 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 NICN1Q9BSH3 213 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 LPAR5Q9H1C0 372 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 SLC2A8Q9NY64 477 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 COA4Q9NYJ1 87 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 PSORS1C1Q9UIG5 152 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 AK3Q9UIJ7 227 aa6.62□□□□□ -1.35
CAPN3-208ENST00000397204 IGKV1-6A0A0C4DH72 117 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 FAM223BA6NKX1 122 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 SRRM4A7MD48 611 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 TRDCB7Z8K6 153 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 MYL12BO14950 172 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 TRBV12-3P01733 135 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 OR9G9P0C7N8 305 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RANBP1P43487 201 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 ATP5G2Q06055 141 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 TPBGQ13641 420 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 INSL4Q14641 139 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 DEFB114Q30KQ6 69 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 CD300EQ496F6 205 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 HSD17B12Q53GQ0 312 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RBM48Q5RL73 367 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RNLSQ5VYX0 342 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 CEACAM19Q7Z692 300 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 FAM223AQ8IWN6 122 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 DEFB125Q8N687 156 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 PACRGLQ8N7B6 248 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 TEX45Q8NA69 505 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 ADAD2Q8NCV1 583 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 OR6M1Q8NGM8 313 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 OR4A4PQ8NGN8 299 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 CMSS1Q9BQ75 279 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 HDHD3Q9BSH5 251 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 C12orf4Q9NQ89 552 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 C8orf4Q9NR00 106 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 RDH8Q9NYR8 311 aa6.61□□□□□ -1.35
CAPN3-208ENST00000397204 TECRQ9NZ01 308 aaKnown RBP6.61□□□□□ -1.35
CAPN3-208ENST00000397204 TRBV9A0A0B4J1U6 114 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 ERICH4A6NGS2 130 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 FOXI3A8MTJ6 420 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-208ENST00000397204 OR11H12B2RN74 326 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 RBMXL2O75526 392 aaKnown RBP6.6□□□□□ -1.35
CAPN3-208ENST00000397204 TUSC2O75896 110 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 DIRAS3O95661 229 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 UCHL1P09936 223 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 KIR2DS2P43631 304 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 UBE2KP61086 200 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 RHOGP84095 191 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 PRSS8Q16651 343 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 RTL8BQ17RB0 113 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 MRGPRG-AS1Q2M3A8 158 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 VMA21Q3ZAQ7 101 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 HARBI1Q96MB7 349 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 PHB2Q99623 299 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 FAM110AQ9BQ89 295 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 CENPOQ9BU64 300 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 PLEKHA3Q9HB20 300 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 RETNQ9HD89 108 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms