RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FIP1L1Q6UN15 594 aaKnown RBP11.61□□□□□ -0.55
NUP98-204ENST00000397004 ACY3Q96HD9 319 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 CBLN4Q9NTU7 201 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 LRP5LA4QPB2 252 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 TRA2AQ13595 282 aaKnown RBP eCLIP11.61□□□□□ -0.55
NUP98-204ENST00000397004 MRPL37Q9BZE1 423 aaKnown RBP11.61□□□□□ -0.55
NUP98-204ENST00000397004 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 HBZP02008 142 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 GRPP07492 148 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 RAB4BP61018 213 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 SSPNQ14714 243 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 SLC10A1Q14973 349 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 PLPPR2Q96GM1 343 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 FAM173AQ9BQD7 235 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 QTRT1Q9BXR0 403 aaKnown RBP11.61□□□□□ -0.55
NUP98-204ENST00000397004 SMPD2O60906 423 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 GCGP01275 180 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 MPV17P39210 176 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
NUP98-204ENST00000397004 LINC00696Q6ZRV3 163 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 BEND2Q8NDZ0 799 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 NEIL1Q96FI4 390 aaPredicted RBP11.6□□□□□ -0.55
NUP98-204ENST00000397004 PATZ1Q9HBE1 687 aaKnown RBP11.6□□□□□ -0.55
NUP98-204ENST00000397004 BOKQ9UMX3 212 aaPredicted RBP11.6□□□□□ -0.55
NUP98-204ENST00000397004 TECTAO75443 2155 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 SOX15O60248 233 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 PSG7Q13046 419 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 RNFT1Q5M7Z0 435 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 RFESDQ8TAC1 157 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 NOL4LQ96MY1 436 aaPredicted RBP11.6□□□□□ -0.55
NUP98-204ENST00000397004 FOXJ2Q9P0K8 574 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 NXPH2O95156 264 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 HAND1O96004 215 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
NUP98-204ENST00000397004 MRGPRDQ8TDS7 321 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 OR5B12Q96R08 314 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
NUP98-204ENST00000397004 DMXL1Q9Y485 3027 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 GRIFINA4D1Z8 144 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 YPEL1O60688 119 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
NUP98-204ENST00000397004 OR1C1Q15619 314 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 MOB1BQ7L9L4 216 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 VKORC1L1Q8N0U8 176 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 OR10P1Q8NGE3 313 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 YPEL2Q96QA6 119 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 C9orf172C9J069 976 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 F2Z2F3 143 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 PLP2Q04941 152 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 CISD2Q8N5K1 135 aaKnown RBP11.59□□□□□ -0.55
NUP98-204ENST00000397004 ANAPC16Q96DE5 110 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 MANBALQ9NQG1 85 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
NUP98-204ENST00000397004 HNF1AP20823 631 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 CASP6P55212 293 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 DIRC2Q96SL1 478 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
NUP98-204ENST00000397004 EDDM3BP56851 147 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 SPCS3P61009 180 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
NUP98-204ENST00000397004 C1orf210Q8IVY1 113 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 OR13A1Q8NGR1 328 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 ELOVL5Q9NYP7 299 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 TRAV3A0A0B4J244 114 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 PRSS46E5RG02 174 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 COX5AP20674 150 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 ADMP35318 185 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 SRP14P37108 136 aaKnown RBP11.58□□□□□ -0.56
NUP98-204ENST00000397004 C6orf15Q6UXA7 325 aaPredicted RBP11.58□□□□□ -0.56
NUP98-204ENST00000397004 K7EN84 100 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 TCAPO15273 167 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 TMPRSS2O15393 492 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 CDC34P49427 236 aaPredicted RBP11.58□□□□□ -0.56
NUP98-204ENST00000397004 FOXF2Q12947 444 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 DCAF12Q5T6F0 453 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 CYB5R2Q6BCY4 276 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 MRPL41Q8IXM3 137 aaKnown RBP11.58□□□□□ -0.56
NUP98-204ENST00000397004 SLC25A40Q8TBP6 338 aa11.58□□□□□ -0.56
NUP98-204ENST00000397004 VENTXO95231 258 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 SYNGR4O95473 234 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 GALMQ96C23 342 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 RTL8AQ9BWD3 113 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 NCOR1O75376 2440 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 A0A0U1RQK1 487 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 ZNF320A2RRD8 509 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 MARCH11A6NNE9 402 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 CLDN14O95500 239 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 IGHV3-13P01766 116 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 IGHV3-7P01780 117 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 THBS3P49746 956 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 PPP1CBP62140 327 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 Q6ZWC4 215 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 SPRR3Q9UBC9 169 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 WDR83OSQ9Y284 106 aa11.57□□□□□ -0.56
NUP98-204ENST00000397004 SCO2A0A1W2PP80 73 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms