RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 OR8U1Q8NH10 309 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 MRGPRFQ96AM1 343 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 AKR1E2Q96JD6 320 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 RSRP1Q9BUV0 290 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 GHITMQ9H3K2 345 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 GPN1Q9HCN4 374 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-202ENST00000396828 FLVCR2Q9UPI3 526 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 SESN1Q9Y6P5 492 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 A0A087X0M5 115 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 IGKV1D-13A0A0B4J2D9 117 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 A0A1B0GX30 115 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 GPR31O00270 319 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 TOR1AO14656 332 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 HSD17B6O14756 317 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 AMY1AP04745 511 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 IGKV1-13P0DP09 117 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 AKR1C4P17516 323 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 ANXA7P20073 488 aaKnown RBP8.22□□□□□ -1.09
NEDD8-202ENST00000396828 VDAC2P45880 294 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-202ENST00000396828 GNG10P50151 68 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 PRRX1P54821 245 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 PIGPP57054 158 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 UBE2MP61081 183 aaKnown RBP8.22□□□□□ -1.09
NEDD8-202ENST00000396828 MSMO1Q15800 293 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 TATDN3Q17R31 274 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 C4orf46Q504U0 113 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 TMEM128Q5BJH2 165 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 SLC25A42Q86VD7 318 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 C8orf31Q8N9H6 132 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 ZBTB34Q8NCN2 500 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 WFDC9Q8NEX5 89 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 OR4F17Q8NGA8 305 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 OR5AU1Q8NGC0 362 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 OR4F4Q96R69 305 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 ABHD14AQ9BUJ0 271 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 ALX4Q9H161 411 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-202ENST00000396828 OR2D2Q9H210 308 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 TMEM133Q9H2Q1 129 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 C5orf66Q9H5L9 145 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 ZNF221Q9UK13 617 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 PSG11Q9UQ72 335 aa8.22□□□□□ -1.09
NEDD8-202ENST00000396828 TEX13DA0A0J9YY54 714 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-202ENST00000396828 K7EIL1 84 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 IGHV3-7P01780 117 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 IL5P05113 134 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 OR4E1P0C645 316 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 PI3P19957 117 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 GNRHRP30968 328 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 GPR12P47775 334 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 KRTAP10-11P60412 298 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 PHLDA2Q53GA4 152 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 ARSJQ5FYB0 599 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-202ENST00000396828 MINOS1Q5TGZ0 78 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 GLDNQ6ZMI3 551 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF818PQ6ZRF7 136 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 SGPP2Q8IWX5 399 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 ABHD12Q8N2K0 398 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 ADAD2Q8NCV1 583 aaKnown RBP8.21□□□□□ -1.1
NEDD8-202ENST00000396828 BVESQ8NE79 360 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 OR9G1Q8NH87 305 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 LEAP2Q969E1 77 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-202ENST00000396828 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 PARP12Q9H0J9 701 aaKnown RBP8.21□□□□□ -1.1
NEDD8-202ENST00000396828 CCL28Q9NRJ3 127 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 SLC2A9Q9NRM0 540 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 PIPOXQ9P0Z9 390 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 PITPNC1Q9UKF7 332 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 RNF150Q9ULK6 438 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 KCNIP3Q9Y2W7 256 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 MINOS1-NBL1R4GNA1 71 aa8.21□□□□□ -1.1
NEDD8-202ENST00000396828 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 SNRPGP15A8MWD9 76 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 RAB29O14966 203 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 CREBL2O60519 120 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 HLA-AP01891 365 aaKnown RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 ANXA3P12429 323 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 CD33P20138 364 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 VAMP1P23763 118 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 IL3RAP26951 378 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 CD34P28906 385 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF134P52741 427 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 RND3P61587 244 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 CBX3Q13185 183 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 CT45A1Q5HYN5 189 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 FAM53AQ6NSI3 398 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 C11orf87Q6NUJ2 197 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 SLC25A48Q6ZT89 311 aaKnown RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 DRAM1Q8N682 238 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF439Q8NDP4 499 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 OR10X1Q8NGY0 326 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 CT45A3Q8NHU0 189 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 RTN4IP1Q8WWV3 396 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 ABHD14BQ96IU4 210 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 S1PR3Q99500 378 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms