RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 TMEM88Q6PEY1 159 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 WDYHV1Q96HA8 205 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 MRPS16Q9Y3D3 137 aaKnown RBP13.34□□□□□ -0.27
GNE-202ENST00000396594 GCGP01275 180 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 GPX4P36969 197 aaPredicted RBP13.34□□□□□ -0.27
GNE-202ENST00000396594 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
GNE-202ENST00000396594 OR4A47Q6IF82 309 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 SCTP09683 121 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 VSIG10L2P0DP72 767 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 TIMP3P35625 211 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 DDB2Q92466 427 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 H7C1H1 209 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 ZIC3O60481 467 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 PMCHL1Q16048 86 aa13.34□□□□□ -0.27
GNE-202ENST00000396594 HKR1P10072 659 aa13.33□□□□□ -0.27
GNE-202ENST00000396594 BTF3P20290 206 aaKnown RBP13.33□□□□□ -0.27
GNE-202ENST00000396594 DLX1P56177 255 aa13.33□□□□□ -0.27
GNE-202ENST00000396594 TGIF1Q15583 401 aa13.33□□□□□ -0.27
GNE-202ENST00000396594 PMCHL2Q9BQD1 86 aa13.33□□□□□ -0.27
GNE-202ENST00000396594 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.27
GNE-202ENST00000396594 CHODLQ9H9P2 273 aa13.33□□□□□ -0.27
GNE-202ENST00000396594 CXCL3P19876 107 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 NPPCP23582 126 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 NUTF2P61970 127 aaKnown RBP13.33□□□□□ -0.28
GNE-202ENST00000396594 IGSF11Q5DX21 431 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 OR4C12Q96R67 309 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 SSBP3Q9BWW4 388 aaPredicted RBP13.33□□□□□ -0.28
GNE-202ENST00000396594 PF4V1P10720 104 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 PDZD11Q5EBL8 140 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 CBLN4Q9NTU7 201 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 ZSWIM8A7E2V4 1837 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 IGHV2OR16-5A0A0B4J2B6 119 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 DCAF12L2Q5VW00 463 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 C19orf48Q6RUI8 117 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 CLEC9AQ6UXN8 241 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 RRN3P1Q2M238 152 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 AMELYQ99218 206 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 CBY1Q9Y3M2 126 aa13.33□□□□□ -0.28
GNE-202ENST00000396594 UBE2V2Q15819 145 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 OR51M1Q9H341 326 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 KBTBD11-OT1A0A1B0GTJ5 212 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 PHOX2AO14813 284 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 PIN1P1O15428 100 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 CD5P06127 495 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 UCP1P25874 307 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 CAMPP49913 170 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 SMUG1Q53HV7 270 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 SPRED2Q7Z698 418 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 FAM169BQ8N8A8 192 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 RNF5Q99942 180 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 HYAL3O43820 417 aaPredicted RBP13.32□□□□□ -0.28
GNE-202ENST00000396594 COTL1Q14019 142 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 LDLRAD3Q86YD5 345 aa13.32□□□□□ -0.28
GNE-202ENST00000396594 YPEL1O60688 119 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 F5P12259 2224 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 TWIST1Q15672 202 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 ZNF738Q8NE65 137 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 ZNF488Q96MN9 340 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 YPEL2Q96QA6 119 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 HDHD3Q9BSH5 251 aaPredicted RBP13.31□□□□□ -0.28
GNE-202ENST00000396594 CECR9P0C854 216 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 TMEM177Q53S58 311 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 ASPHD2Q6ICH7 369 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 HSPB7Q9UBY9 170 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 AMY1AP04745 511 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 TCF24Q7RTU0 167 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 PQLC2LA1A4F0 135 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 PAX1P15863 534 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 LHX2P50458 406 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 IBA57Q5T440 356 aaKnown RBP13.31□□□□□ -0.28
GNE-202ENST00000396594 WDR25Q64LD2 544 aaPredicted RBP13.31□□□□□ -0.28
GNE-202ENST00000396594 DHRS11Q6UWP2 260 aa13.31□□□□□ -0.28
GNE-202ENST00000396594 MRPL13Q9BYD1 178 aaKnown RBP13.31□□□□□ -0.28
GNE-202ENST00000396594 C17orf100A8MU93 164 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 IGFBP3P17936 291 aaPredicted RBP13.3□□□□□ -0.28
GNE-202ENST00000396594 C20orf204Q6ZNR8 217 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 FLVCR1-AS1Q8TAF5 88 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 LINC00052Q96N35 136 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 SNURFLB1AK76 121 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 C11orf42Q8N5U0 333 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 TCAPO15273 167 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 NTN1O95631 604 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 PEMTQ9UBM1 199 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 DANCRP0C864 163 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 RND2P52198 227 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 DLX6P56179 175 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 DRAM1Q8N682 238 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 MAP1LC3AQ9H492 121 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 OTOFQ9HC10 1997 aa13.3□□□□□ -0.28
GNE-202ENST00000396594 UMODP07911 640 aa13.29□□□□□ -0.28
GNE-202ENST00000396594 CD99P14209 185 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms