RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 NUP210LQ5VU65 1888 aa7.56□□□□□ -1.2
MSH5-205ENST00000395853 ZNF787Q6DD87 383 aa7.56□□□□□ -1.2
MSH5-205ENST00000395853 CT55Q8WUE5 264 aa7.56□□□□□ -1.2
MSH5-205ENST00000395853 APOBEC3DQ96AK3 386 aaPredicted RBP7.56□□□□□ -1.2
MSH5-205ENST00000395853 TMEM204Q9BSN7 226 aa7.56□□□□□ -1.2
MSH5-205ENST00000395853 NECAP2Q9NVZ3 263 aa7.56□□□□□ -1.2
MSH5-205ENST00000395853 DSPP15924 2871 aaKnown RBP7.56□□□□□ -1.2
MSH5-205ENST00000395853 TMEM212A6NML5 194 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 DEGS1O15121 323 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 IFNA1P01562 189 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 HPNP05981 417 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 IGHV4-34P06331 123 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 PVRP15151 417 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 SFTPDP35247 375 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 RHOBP62745 196 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ZNF117Q03924 483 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 FAM166AQ6J272 317 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ADGRE4PQ86SQ3 457 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 LSRQ86X29 649 aaPredicted RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 OR4N5Q8IXE1 308 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 DOK4Q8TEW6 326 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 MBD6Q96DN6 1003 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 CLEC7AQ9BXN2 247 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ULBP2Q9BZM5 246 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 GP6Q9HCN6 339 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 PLA2G3Q9NZ20 509 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 IL36GQ9NZH8 169 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 B4GALT7Q9UBV7 327 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 DMXL2Q8TDJ6 3036 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ITPR1Q14643 2758 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 SAA2-SAA4A0A096LPE2 208 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 A6NDN8 102 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ZIC2O95409 532 aaPredicted RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 VDAC1P21796 283 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 USF1P22415 310 aaPredicted RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 RPS15AP62244 130 aaKnown RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 EWSR1Q01844 656 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSH5-205ENST00000395853 MEP1BQ16820 701 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ACSF3Q4G176 576 aaPredicted RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 DEFB134Q4QY38 66 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ZNF766Q5HY98 468 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 MOB1BQ7L9L4 216 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 CDC20BQ86Y33 519 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ZNF611Q8N823 705 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 PP6455Q8WZ26 134 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 ST6GALNAC6Q969X2 333 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 OR2A5Q96R48 311 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
MSH5-205ENST00000395853 TP73-AS1Q9UF72 201 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 SPTBP11277 2137 aa7.55□□□□□ -1.2
MSH5-205ENST00000395853 LAMA1P25391 3075 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 A0A0G2JLM5 398 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 ZNF850A8MQ14 1090 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 ISLRO14498 428 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 PITX3O75364 302 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 CA1P00915 261 aaPredicted RBP7.54□□□□□ -1.2
MSH5-205ENST00000395853 ATP5G2Q06055 141 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 SRSF1Q07955 248 aaKnown RBP eCLIP7.54□□□□□ -1.28e-7■■■□□ 16.3
MSH5-205ENST00000395853 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 VAX1Q5SQQ9 334 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 GLIPR1L1Q6UWM5 242 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 NUP43Q8NFH3 380 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 OR5D14Q8NGL3 314 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 NT5CQ8TCD5 201 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 NRGNQ92686 78 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 PIGTQ969N2 578 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 TM4SF19Q96DZ7 209 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 COMMD5Q9GZQ3 224 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 SH2D2AQ9NP31 389 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 GCN1Q92616 2671 aaKnown RBP7.54□□□□□ -1.2
MSH5-205ENST00000395853 TNRC6AQ8NDV7 1962 aaKnown RBP7.54□□□□□ -1.2
MSH5-205ENST00000395853 A0A1W2PS18 150 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 LRP5LA4QPB2 252 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 GYPAP02724 150 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 NPY1RP25929 384 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 CA7P43166 264 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 PPP1CAP62136 330 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 ROM1Q03395 351 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 MFGE8Q08431 387 aaPredicted RBP7.54□□□□□ -1.2
MSH5-205ENST00000395853 C1orf61Q13536 156 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 TMEM64Q6YI46 380 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 PRSS41Q7RTY9 318 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 HAPLN4Q86UW8 402 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 TTC9CQ8N5M4 171 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 ZNF676Q8N7Q3 588 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 NXF5Q9H1B4 397 aaKnown RBP7.54□□□□□ -1.2
MSH5-205ENST00000395853 PILRAQ9UKJ1 303 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 ASPMQ8IZT6 3477 aa7.54□□□□□ -1.2
MSH5-205ENST00000395853 GTF3C1Q12789 2109 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 A0A1B0GVT2 93 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 C10orf142B7Z368 130 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 J3QKU1 62 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 TNFP01375 233 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 H2BFMP0C1H6 154 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 ZNF20P17024 532 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 CBLN1P23435 193 aa7.53□□□□□ -1.2
MSH5-205ENST00000395853 NKX2-1P43699 371 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms