RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 UCP3P55916 312 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 DCTN2Q13561 401 aaKnown RBP13.12□□□□□ -0.31
CXCL1-201ENST00000395761 FAAP20Q6NZ36 180 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 OR8H1Q8NGG4 311 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 CITED1Q99966 193 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 SCP2D1Q9UJQ7 156 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 LINC00854A0A1B0GVQ3 168 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 DEFA1P59665 94 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 DEFA3P59666 94 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 MMDQ15546 238 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 AADACL3Q5VUY0 350 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 FAM71E2Q8N5Q1 922 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 ZNF645Q8N7E2 425 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 MOB3AQ96BX8 217 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 MCUBQ9NWR8 336 aa13.11□□□□□ -0.31
CXCL1-201ENST00000395761 PEX14O75381 377 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 SLC22A5O76082 557 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 IGKV1-16P04430 117 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 DUTP33316 252 aaKnown RBP13.1□□□□□ -0.31
CXCL1-201ENST00000395761 BTCP35070 178 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 ECI1P42126 302 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 MSMO1Q15800 293 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 C11orf44Q8N8P7 122 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 NPBQ8NG41 125 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 WIPF2Q8TF74 440 aaPredicted RBP13.1□□□□□ -0.31
CXCL1-201ENST00000395761 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 CCL28Q9NRJ3 127 aa13.1□□□□□ -0.31
CXCL1-201ENST00000395761 LIN7CQ9NUP9 197 aaKnown RBP13.1□□□□□ -0.31
CXCL1-201ENST00000395761 LINC00473A8K010 186 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 NBR2O15453 112 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 SLC6A1P30531 599 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 FXYD4P59646 89 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 HERV-K104P61576 105 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
CXCL1-201ENST00000395761 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 LPCAT3Q6P1A2 487 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 IDO2Q6ZQW0 420 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 BVESQ8NE79 360 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 OR13C8Q8NGS7 320 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 SECTM1Q8WVN6 248 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 MRGPRFQ96AM1 343 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 NOL4LQ96MY1 436 aaPredicted RBP13.09□□□□□ -0.31
CXCL1-201ENST00000395761 HSPB9Q9BQS6 159 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
CXCL1-201ENST00000395761 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 LINC00527Q9UJ94 153 aa13.09□□□□□ -0.31
CXCL1-201ENST00000395761 IGHG2P01859 326 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 APOA2P02652 100 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 THBS3P49746 956 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 RPS16P62249 146 aaKnown RBP13.08□□□□□ -0.32
CXCL1-201ENST00000395761 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.32
CXCL1-201ENST00000395761 EIF4EBP1Q13541 118 aaPredicted RBP13.08□□□□□ -0.32
CXCL1-201ENST00000395761 C10orf99Q6UWK7 81 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 SLC35E3Q7Z769 313 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 POC5Q8NA72 575 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 DDB2Q92466 427 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 SCGB3A2Q96PL1 93 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 GPHA2Q96T91 129 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 SLC5A7Q9GZV3 580 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 GPR132Q9UNW8 380 aa13.08□□□□□ -0.32
CXCL1-201ENST00000395761 NDUFA3O95167 84 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 CD28P10747 220 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 GNRHRP30968 328 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 PSG5Q15238 335 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 C5orf64Q2M2E5 130 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 CENPVQ7Z7K6 275 aaPredicted RBP13.07□□□□□ -0.32
CXCL1-201ENST00000395761 PDPNQ86YL7 162 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 OR5AU1Q8NGC0 362 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 ZFAND1Q8TCF1 268 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 FLYWCH2Q96CP2 140 aaKnown RBP13.07□□□□□ -0.32
CXCL1-201ENST00000395761 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 RNF5Q99942 180 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 RSRP1Q9BUV0 290 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 FBXL15Q9H469 300 aa13.07□□□□□ -0.32
CXCL1-201ENST00000395761 SRRM4A7MD48 611 aaKnown RBP13.06□□□□□ -0.32
CXCL1-201ENST00000395761 FCN1O00602 326 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 RRHO14718 337 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 NDUFB6O95139 128 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 CCR6P51684 374 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 RBMS2Q15434 407 aaKnown RBP13.06□□□□□ -0.32
CXCL1-201ENST00000395761 SLC38A6Q8IZM9 456 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 ZNF486Q96H40 463 aaPredicted RBP13.06□□□□□ -0.32
CXCL1-201ENST00000395761 KIAA1456Q9P272 454 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 COPZ2Q9P299 210 aa13.06□□□□□ -0.32
CXCL1-201ENST00000395761 FAM240BA0A1B0GVZ2 78 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 TNFSF12O43508 249 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 IGLV2-23P01705 113 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 BRWD1-AS2P59051 145 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 TAGLNQ01995 201 aaKnown RBP13.05□□□□□ -0.32
CXCL1-201ENST00000395761 RTL8BQ17RB0 113 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 TMEM177Q53S58 311 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 TCTEX1D4Q5JR98 221 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms