RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 AKAIN1P0CW23 69 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 SFTPDP35247 375 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 RBM11P57052 281 aaKnown RBP3.46□□□□□ -1.86
HERC4-204ENST00000395198 DNM1P46Q6ZS02 220 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 LCNL1Q6ZST4 164 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 FBXL14Q8N1E6 418 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 ZNF615Q8N8J6 731 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 OR4C3Q8NH37 302 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 ADAT3Q96EY9 351 aaPredicted RBP3.46□□□□□ -1.86
HERC4-204ENST00000395198 OR4C12Q96R67 309 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 GGTLC1Q9BX51 225 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 RBKSQ9H477 322 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 SAA2-SAA4A0A096LPE2 208 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 IGKV6D-21A0A0A0MT36 114 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 MEGF11A6BM72 1044 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 OR51F1A6NGY5 319 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 ZNF705GA8MUZ8 300 aaPredicted RBP3.46□□□□□ -1.86
HERC4-204ENST00000395198 PIRO00625 290 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 BCL2L11O43521 198 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 CD14P08571 375 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 BTCP35070 178 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 RPA3P35244 121 aaPredicted RBP3.46□□□□□ -1.86
HERC4-204ENST00000395198 SAA4P35542 130 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 MARCKSL1P49006 195 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 TMEM244Q5VVB8 128 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 GTF2H5Q6ZYL4 71 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 LHFPL1Q86WI0 220 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 CIARTQ8N365 385 aaPredicted RBP3.46□□□□□ -1.86
HERC4-204ENST00000395198 DCAF4L2Q8NA75 395 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 OR2T6Q8NHC8 308 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 FGF13Q92913 245 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 SLC25A38Q96DW6 304 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 MMP26Q9NRE1 261 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 NUDT4Q9NZJ9 180 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 COQ4Q9Y3A0 265 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 DNAJC13O75165 2243 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 FAM186AA6NE01 2351 aa3.46□□□□□ -1.86
HERC4-204ENST00000395198 H7C1C5 153 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 BUB3O43684 328 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SIX6O95475 246 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ATP5G1P05496 136 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 CCL1P22362 96 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 UBE2NP61088 152 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 LCN6P62502 163 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 GRB2P62993 217 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 STAC2Q6ZMT1 411 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 C22orf34Q6ZV56 151 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ZNF550Q7Z398 422 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SGPP2Q8IWX5 399 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SLC25A45Q8N413 288 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 PHYHIPLQ96FC7 376 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 MCHR1Q99705 422 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SPIN2AQ99865 258 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SPIN2BQ9BPZ2 258 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ASCC3Q8N3C0 2202 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 TRAV26-2A0A0B4J265 109 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 FAM236AA0A1B0GUQ0 79 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 FAM236BA0A1B0GV22 79 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RBFOX3A6NFN3 312 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 C2CD4DB7Z1M9 353 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 FNDC10F2Z333 226 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 AGPAT2O15120 278 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ZFAND5O76080 213 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 NDUFB4O95168 129 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 NOVP48745 357 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 CTF1Q16619 201 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ANXA2RQ3ZCQ2 193 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 TMEM255AQ5JRV8 349 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ZNF506Q5JVG8 444 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 TMEM14EPQ6UXP3 125 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 TRPT1Q86TN4 253 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 SAMD12Q8N8I0 201 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 DNAJA3Q96EY1 480 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ZNF419Q96HQ0 510 aaPredicted RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 PKMYT1Q99640 499 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 VAX2Q9UIW0 290 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 CASP8AP2Q9UKL3 1982 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 LTBP1Q14766 1721 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 hCG_1818297A0A087WSY0 165 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 A0A096LPK6 155 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 C7orf71A4D174 169 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 J3QQQ9 107 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 TNFSF13O75888 250 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 KLK2P20151 261 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 FKBP2P26885 142 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 CX3CL1P78423 397 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 SLC35E4Q6ICL7 350 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 CNIH2Q6PI25 160 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 C1QL2Q7Z5L3 287 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SFTPA2Q8IWL1 248 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 OR5A1Q8NGJ0 315 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 BORCS7Q96B45 105 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ZNF689Q96CS4 500 aaPredicted RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 SLAMF6Q96DU3 332 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RTP4Q96DX8 246 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SLIRPQ9GZT3 109 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms