RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RND1Q92730 232 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 TMEM191AQ9H0A3 160 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CLN8Q9UBY8 286 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 RHBDL1O75783 438 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 SLC25A6P12236 298 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 UQCRFS1P47985 274 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 LHX2P50458 406 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 TCL1AP56279 114 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 NHLH1Q02575 133 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 RPEL1Q2QD12 228 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 FAM162BQ5T6X4 162 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 C16orf54Q6UWD8 224 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 Q8IYB0 196 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 CLDND2Q8NHS1 167 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 PECRQ9BY49 303 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 KCNIP2Q9NS61 270 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 OR1A1Q9P1Q5 309 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 RALYQ9UKM9 306 aaKnown RBP4.86□□□□□ -1.63
RFFL-202ENST00000394597 ABCA4P78363 2273 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 A0A1W2PP11 408 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 A6NDN8 102 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 K7N7A8 449 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 AGFG2O95081 481 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 CLDN18P56856 261 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 SLC38A11Q08AI6 406 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 OCIAD2Q56VL3 154 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 C1orf100Q5SVJ3 147 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 CYP2G1PQ6ZSU1 146 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 TMEM256Q8N2U0 113 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 OR1K1Q8NGR3 316 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 BOD1Q96IK1 185 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 PEF1Q9UBV8 284 aaKnown RBP4.86□□□□□ -1.63
RFFL-202ENST00000394597 IFITM10A6NMD0 228 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 SIRPB1O00241 398 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 SERF1AO75920 110 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 CBLN1P23435 193 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 NBL1P41271 181 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 MRPS11P82912 194 aaKnown RBP4.86□□□□□ -1.63
RFFL-202ENST00000394597 KIAA1644Q3SXP7 199 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 OR5A2Q8NGI9 324 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 WDYHV1Q96HA8 205 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 CST9LQ9H4G1 147 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 RPRMQ9NS64 109 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 TMEM242Q9NWH2 141 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 TBL2Q9Y4P3 447 aaKnown RBP4.86□□□□□ -1.63
RFFL-202ENST00000394597 TRAV30A0A087WSZ9 112 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 TRAV39A0A0B4J263 110 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 SPINT2O43291 252 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 VDAC1P21796 283 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 RPS16P62249 146 aaKnown RBP4.86□□□□□ -1.63
RFFL-202ENST00000394597 LCN2P80188 198 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 SMAGPQ0VAQ4 97 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
RFFL-202ENST00000394597 SLC25A34Q6PIV7 304 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 BPIFA4PQ86YQ2 179 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 PRSS33Q8NF86 280 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 IMMP2LQ96T52 175 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 CDC42EP3Q9UKI2 254 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 ROS1P08922 2347 aa4.86□□□□□ -1.63
RFFL-202ENST00000394597 PCNX2A6NKB5 2137 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ISLRO14498 428 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 LMX1BO60663 402 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 TUSC2O75896 110 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 FCER1GP30273 86 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 THBS3P49746 956 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 EDDM3BP56851 147 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SERF2P84101 59 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 AESQ08117 197 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 FHL1Q13642 323 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 NRN1LQ496H8 165 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CXorf66Q5JRM2 361 aaPredicted RBP4.85□□□□□ -1.63
RFFL-202ENST00000394597 OR2Z1Q8NG97 314 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 DERL1Q9BUN8 251 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 GNG12Q9UBI6 72 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ZNF835Q9Y2P0 537 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 COX11Q9Y6N1 276 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CREBBPQ92793 2442 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 A0A1W2PN81 502 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 CRYM-AS1A6NIL9 109 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ZNF716A6NP11 495 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ETV2O00321 342 aaPredicted RBP4.85□□□□□ -1.63
RFFL-202ENST00000394597 MPPED1O15442 326 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SPRY3O43610 288 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 PDCD6O75340 191 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 PSG1P11464 419 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ARL3P36405 182 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SLC35B1P78383 322 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 EDDM3AQ14507 147 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 PDCD1Q15116 288 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SMIM21Q3B7S5 101 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 ALKBH6Q3KRA9 238 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 AMMECR1LQ6DCA0 310 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 GGNQ86UU5 652 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 C1orf174Q8IYL3 243 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 SLC25A40Q8TBP6 338 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 TNFRSF14Q92956 283 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 DAZAP1Q96EP5 407 aaKnown RBP4.85□□□□□ -1.63
RFFL-202ENST00000394597 ABHD17AQ96GS6 310 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 C20orf144Q9BQM9 153 aa4.85□□□□□ -1.63
RFFL-202ENST00000394597 RTBDNQ9BSG5 229 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms