RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PRSS8Q16651 343 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 FAM201AQ5SY85 155 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 DTD1Q8TEA8 209 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 QTRT1Q9BXR0 403 aaKnown RBP11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 OR51M1Q9H341 326 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 PLSCR4Q9NRQ2 329 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 SOX15O60248 233 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 IGHV2-70P01814 119 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 OR9G9P0C7N8 305 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 SELLP14151 372 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 FIP1L1Q6UN15 594 aaKnown RBP11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 IGFL3Q6UXB1 125 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 RBMXL3Q8N7X1 1067 aaKnown RBP11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 Q8TCH9 128 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 SNX22Q96L94 193 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 PLCE1Q9P212 2302 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 C1QTNF9BB2RNN3 333 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 GZMHP20718 246 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 TUBG1P23258 451 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 Q6ZS92 163 aa11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
GTF2F1-201ENST00000394456 TRAV3A0A0B4J244 114 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 J3QW42 95 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 CRYAAP02489 173 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 SERF2P84101 59 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 MRGPRGQ86SM5 289 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 OR10G9Q8NGN4 311 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 OR10G7Q8NGN6 311 aa11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.61
GTF2F1-201ENST00000394456 OOEPA6NGQ2 149 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 PHOX2AO14813 284 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 CYB5R3P00387 301 aaPredicted RBP11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 CGAP01215 116 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 NPPCP23582 126 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 RPL39P5Q59GN2 51 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNF383Q8NA42 475 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 LRRC29Q8WV35 223 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 MEGF10Q96KG7 1140 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 TMEM204Q9BSN7 226 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 SIRT7Q9NRC8 400 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 FAM215AQ9Y5M1 114 aa11.21□□□□□ -0.62
GTF2F1-201ENST00000394456 ADGRG4Q8IZF6 3080 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 TRAV38-1A0A0B4J264 116 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 CLDN34H7C241 214 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 PAGE4O60829 102 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 SLC35E4Q6ICL7 350 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 DUX4L9Q6RFH8 374 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 BHLHA15Q7RTS1 189 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 H2BFWTQ7Z2G1 175 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 HIST3H2BBQ8N257 126 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 NINJ1Q92982 152 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 RAB24Q969Q5 203 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 OR4F4Q96R69 305 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 AGMATQ9BSE5 352 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 ROS1P08922 2347 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 IGHV1-18A0A0C4DH31 117 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 FABP4P15090 132 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 UBE2G2P60604 165 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 FOXC1Q12948 553 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 OR2Z1Q8NG97 314 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 CXXC4Q9H2H0 198 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 PARLQ9H300 379 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 DUSP13Q9UII6 198 aa11.2□□□□□ -0.62
GTF2F1-201ENST00000394456 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 C15orf62A8K5M9 175 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 FCGR3BO75015 233 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 LY86O95711 162 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 RND2P52198 227 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNF134P52741 427 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 RPL23P62829 140 aaKnown RBP11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 Q8N7P7 452 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNRF1Q8ND25 227 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 TCEAL7Q9BRU2 100 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 NPCDR1Q9BY65 106 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 GAR1Q9NY12 217 aaKnown RBP11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 GAB2Q9UQC2 676 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 TLN1Q9Y490 2541 aaKnown RBP11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 IGHV2OR16-5A0A0B4J2B6 119 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 RNF212BA8MTL3 300 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 IFNL4K9M1U5 179 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 SLC31A2O15432 143 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms