RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TET2Q6N021 2002 aaPredicted RBP12.24□□□□□ -0.45
CCT4-201ENST00000394440 TAS2R30P59541 319 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 H2BFWTQ7Z2G1 175 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 LINC00311Q8N616 119 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 LRRC20Q8TCA0 184 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.24□□□□□ -0.45
CCT4-201ENST00000394440 ASH1LQ9NR48 2969 aaKnown RBP12.24□□□□□ -0.45
CCT4-201ENST00000394440 FAM90A9PA6NNJ1 464 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 GPR37O15354 613 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 UBE2KP61086 200 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
CCT4-201ENST00000394440 ZNF833PQ6ZTB9 187 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 OR4S2Q8NH73 311 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 RNF141Q8WVD5 230 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 GINS3Q9BRX5 216 aa12.24□□□□□ -0.45
CCT4-201ENST00000394440 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
CCT4-201ENST00000394440 MFSD2BA6NFX1 497 aa12.23□□□□□ -0.45
CCT4-201ENST00000394440 A6NNC1 897 aa12.23□□□□□ -0.45
CCT4-201ENST00000394440 ARHGDIBP52566 201 aa12.23□□□□□ -0.45
CCT4-201ENST00000394440 EIF5AL1Q6IS14 154 aaKnown RBP12.23□□□□□ -0.45
CCT4-201ENST00000394440 RAB39BQ96DA2 213 aa12.23□□□□□ -0.45
CCT4-201ENST00000394440 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
CCT4-201ENST00000394440 H3BP45 60 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 OR9G9P0C7N8 305 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 IAPPP10997 89 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 AANATQ16613 207 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 C8orf46Q8TAG6 207 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 RBKSQ9H477 322 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 CST7O76096 145 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 IGHV1-8P0DP01 117 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 NQO2P16083 231 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 SULT1A1P50225 295 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 OR5C1Q8NGR4 320 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 CHODLQ9H9P2 273 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 MIOXQ9UGB7 285 aa12.22□□□□□ -0.45
CCT4-201ENST00000394440 DYNLT3P51808 116 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.45
CCT4-201ENST00000394440 RAB1CQ92928 201 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 NEIL1Q96FI4 390 aaPredicted RBP12.21□□□□□ -0.45
CCT4-201ENST00000394440 PSENENQ9NZ42 101 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 PFDN2Q9UHV9 154 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 DOPEY1Q5JWR5 2465 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 J3QR06 171 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 MED6O75586 246 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 SPP1P10451 314 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 SULT1A2P50226 295 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 ZNF266Q14584 549 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 CLINT1Q14677 625 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 POU2AF1Q16633 256 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 STPG2Q8N412 459 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 EIF4E3Q8N5X7 224 aaKnown RBP12.21□□□□□ -0.45
CCT4-201ENST00000394440 OR8B3Q8NGG8 313 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 TIMD4Q96H15 378 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 OR8B2Q96RD0 313 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 UBTD1Q9HAC8 227 aa12.21□□□□□ -0.45
CCT4-201ENST00000394440 SETXQ7Z333 2677 aaKnown RBP12.21□□□□□ -0.45
CCT4-201ENST00000394440 FBXO24O75426 580 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 CDKN1AP38936 164 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 ZNF137PP52743 207 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 FAM71F2Q6NXP2 309 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 HSD17B13Q7Z5P4 300 aaPredicted RBP12.2□□□□□ -0.46
CCT4-201ENST00000394440 STX12Q86Y82 276 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 ST6GALNAC6Q969X2 333 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 PPIHO43447 177 aaKnown RBP12.2□□□□□ -0.46
CCT4-201ENST00000394440 CRYZL1O95825 349 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 FGF2P09038 288 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 TMEM267Q0VDI3 215 aaPredicted RBP12.2□□□□□ -0.46
CCT4-201ENST00000394440 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 SESN1Q9Y6P5 492 aa12.2□□□□□ -0.46
CCT4-201ENST00000394440 GOSR1O95249 250 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 RBP4P02753 201 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 ERVK-16P61578 105 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 RELBQ01201 579 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 PDLIM3Q53GG5 364 aaPredicted RBP12.19□□□□□ -0.46
CCT4-201ENST00000394440 TMEM14EPQ6UXP3 125 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 SSX9Q7RTT3 188 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 VKORC1L1Q8N0U8 176 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 LY6G5BQ8NDX9 201 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 OR1S2Q8NGQ3 325 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
CCT4-201ENST00000394440 TMEM133Q9H2Q1 129 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 TEX46H3BTG2 121 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 RNF224P0DH78 156 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 ARL16Q0P5N6 197 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 DHRS7BQ6IAN0 325 aaPredicted RBP12.19□□□□□ -0.46
CCT4-201ENST00000394440 ATP5SQ99766 215 aa12.19□□□□□ -0.46
CCT4-201ENST00000394440 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
CCT4-201ENST00000394440 PATZ1Q9HBE1 687 aaKnown RBP12.19□□□□□ -0.46
CCT4-201ENST00000394440 UBR5O95071 2799 aaPredicted RBP12.19□□□□□ -0.46
CCT4-201ENST00000394440 FLNBO75369 2602 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms