RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 GADD45AP24522 165 aa13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 CD40LGP29965 261 aa13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 DUTP33316 252 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 PITPNAQ00169 270 aa13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 SRSF7Q16629 238 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 OR6Q1Q8NGQ2 317 aa13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 ZNF355PQ9NSJ1 428 aa13.97□□□□□ -0.17
PDLIM7-205ENST00000393551 SHOXO15266 292 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 BRI3O95415 125 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 IGLV1-51P01701 117 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 MYL9P24844 172 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 RANBP1P43487 201 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 IL34Q6ZMJ4 242 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 Q8N1Y9 231 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 OR4C12Q96R67 309 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 ADAM30Q9UKF2 790 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 BLOC1S6Q9UL45 172 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 RAB26Q9ULW5 256 aa13.96□□□□□ -0.17
PDLIM7-205ENST00000393551 ANKRD34BA5PLL1 514 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 TRBV12-3P01733 135 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 APELAP0DMC3 54 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 GALP22466 123 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 TAGLNQ01995 201 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 DYRK1AQ13627 763 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 ARFRP1Q13795 201 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 KLF5Q13887 457 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 UBE2UQ5VVX9 321 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 IDO2Q6ZQW0 420 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 GINS4Q9BRT9 223 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 TINAGL1Q9GZM7 467 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 ATG5Q9H1Y0 275 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 Q9H521 79 aa13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 RANGRFQ9HD47 186 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-205ENST00000393551 C13orf42A0A1B0GVH6 325 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 METTL21EPA6NDL7 271 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 CRYZL1O95825 349 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 IGLV2-14P01704 120 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 GABARAPL2P60520 117 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 RTL8BQ17RB0 113 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 CDNFQ49AH0 187 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 TMEM68Q96MH6 324 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 RCHY1Q96PM5 261 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 TXNL4BQ9NX01 149 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 TENM2Q9NT68 2774 aa13.94□□□□□ -0.18
PDLIM7-205ENST00000393551 RYR2Q92736 4967 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 MSGN1A6NI15 193 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 J3QRK9 145 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 FGF9P31371 208 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 UBE2KP61086 200 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 PRSS8Q16651 343 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 ZNF343Q6P1L6 599 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 SPARTQ8N0X7 666 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 TEX45Q8NA69 505 aa13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 ADAD2Q8NCV1 583 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 RBM7Q9Y580 266 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-205ENST00000393551 STARD9Q9P2P6 4700 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 A0A0G2JLM5 398 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 MRPS14O60783 128 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 RRASP10301 218 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 ZP3P21754 424 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 DTYMKP23919 212 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 TALDO1P37837 337 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 RPL30P62888 115 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 HACD4Q5VWC8 232 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 OR9G4Q8NGQ1 327 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 ADTRPQ96IZ2 230 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 RSRP1Q9BUV0 290 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 ST6GALNAC5Q9BVH7 336 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 ELOVL1Q9BW60 279 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 STUB1Q9UNE7 303 aa13.92□□□□□ -0.18
PDLIM7-205ENST00000393551 IGKV1D-13A0A0B4J2D9 117 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 TMEM235A6NFC5 223 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 NOTOA8MTQ0 251 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 C3orf84H3BNL1 204 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 SSX5O60225 188 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 IGKV1-13P0DP09 117 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 NFYAP23511 347 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 SYNJ2BPP57105 145 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 TNXAQ16473 311 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 NUDCD2Q8WVJ2 157 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 SRSF12Q8WXF0 261 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 LYSTQ99698 3801 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 ZNF430Q9H8G1 570 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 C19orf73Q9NVV2 129 aa13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 PEF1Q9UBV8 284 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-205ENST00000393551 HLA-DQB1P01920 261 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 PRH1P02810 166 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 SAA1P0DJI8 122 aaPredicted RBP13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 IGHV4-30-4P0DP06 118 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 PSMB9P28065 219 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 BRWD1-AS2P59051 145 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 ZNF45Q02386 682 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 CBX3Q13185 183 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 VMA21Q3ZAQ7 101 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 C10orf55Q5SWW7 151 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 ZNF645Q8N7E2 425 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 OSR1Q8TAX0 266 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms