RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 IL5P05113 134 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 UBE2KP61086 200 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 DCTN2Q13561 401 aaKnown RBP10.59□□□□□ -0.71
USP44-202ENST00000393091 PDLIM3Q53GG5 364 aaPredicted RBP10.59□□□□□ -0.71
USP44-202ENST00000393091 MINDY2Q8NBR6 621 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 MARVELD1Q9BSK0 173 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 C14orf166Q9Y224 244 aaKnown RBP10.59□□□□□ -0.71
USP44-202ENST00000393091 MOB4Q9Y3A3 225 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 TEX13DA0A0J9YY54 714 aaPredicted RBP10.58□□□□□ -0.72
USP44-202ENST00000393091 MDFIC2A0A1B0GVS7 189 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
USP44-202ENST00000393091 BRI3O95415 125 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 TCRBP04435 133 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 SUPT4H1P63272 117 aaKnown RBP10.58□□□□□ -0.72
USP44-202ENST00000393091 TBC1D26Q86UD7 250 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 PDZD9Q8IXQ8 264 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 C5orf56Q8N8D9 126 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 TSNAXQ99598 290 aaKnown RBP10.58□□□□□ -0.72
USP44-202ENST00000393091 MAP1AP78559 2803 aaPredicted RBP10.58□□□□□ -0.72
USP44-202ENST00000393091 A0A1W2PRD5 423 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 A0A1W2PRF3 423 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 A0A1W2PRM7 423 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 CDS2O95674 445 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 IGHV4-59P01825 116 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 C11orf88Q6PI97 169 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 ABCB10Q9NRK6 738 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 SLC35D1Q9NTN3 355 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 BET1LQ9NYM9 111 aa10.58□□□□□ -0.72
USP44-202ENST00000393091 HLA-DRB1P01911 266 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 AMY1AP04745 511 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 MAS1LP35410 378 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 PIGPP57054 158 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 FXYD4P59646 89 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 SRPXP78539 464 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 C1RLQ9NZP8 487 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 C3orf85A0A1B0GTC6 90 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 H3BUX3 64 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 VSIG10L2P0DP72 767 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 CBX3Q13185 183 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 TMEM187Q14656 261 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 SCGB2B2Q4G0G5 96 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 MOB3BQ86TA1 216 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 Q8N9W7 124 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 WIPF2Q8TF74 440 aaPredicted RBP10.57□□□□□ -0.72
USP44-202ENST00000393091 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
USP44-202ENST00000393091 TRIM77I1YAP6 450 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 SLC25A6P12236 298 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 C16orf87Q6PH81 154 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 C20orf85Q9H1P6 137 aa10.57□□□□□ -0.72
USP44-202ENST00000393091 ZFHX3Q15911 3703 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 CHST1O43916 411 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 IGKV1D-33P01593 117 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 IGKV1-33P01594 117 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 RBMS3Q6XE24 437 aaKnown RBP10.56□□□□□ -0.72
USP44-202ENST00000393091 FAM219AQ8IW50 185 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 LSM10Q969L4 123 aaKnown RBP10.56□□□□□ -0.72
USP44-202ENST00000393091 RBM7Q9Y580 266 aaKnown RBP10.56□□□□□ -0.72
USP44-202ENST00000393091 BTBD17A6NE02 478 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 NBR2O15453 112 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 PRAF2O60831 178 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 SFT2D2O95562 160 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 PGAM2P15259 253 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 PSG5Q15238 335 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 MCUBQ9NWR8 336 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
USP44-202ENST00000393091 RRHO14718 337 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 TMEM11P17152 192 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 COMPP49747 757 aaPredicted RBP10.55□□□□□ -0.72
USP44-202ENST00000393091 CCR6P51684 374 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 GLYATL2Q8WU03 294 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 SRSF8Q9BRL6 282 aaKnown RBP10.55□□□□□ -0.72
USP44-202ENST00000393091 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 GPR137BO60478 399 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 ATG12O94817 140 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 HRASP01112 189 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 IGKV1-16P04430 117 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 REG1BP48304 166 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 ABCA11PQ4W5N1 156 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
USP44-202ENST00000393091 VSTM2AQ8TAG5 236 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 TCTEX1D2Q8WW35 142 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 CACFD1Q9UGQ2 172 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 MAST4O15021 2626 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 DBX1A6NMT0 343 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 RLN1P04808 185 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 FOXRED2Q8IWF2 684 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 SGPP2Q8IWX5 399 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 TP53RKQ96S44 253 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 CHIAQ9BZP6 476 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms