RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PRH1P02810 166 aa16.53■□□□□ 0.24
PTPN11-202ENST00000392597 UQCRFS1P47985 274 aa16.53■□□□□ 0.24
PTPN11-202ENST00000392597 TMEM14EPQ6UXP3 125 aa16.53■□□□□ 0.24
PTPN11-202ENST00000392597 TMEM182Q6ZP80 229 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-202ENST00000392597 KAAG1Q9UBP8 84 aa16.53■□□□□ 0.24
PTPN11-202ENST00000392597 NDUFA2O43678 99 aa16.52■□□□□ 0.24
PTPN11-202ENST00000392597 GRNP28799 593 aaKnown RBP16.52■□□□□ 0.24
PTPN11-202ENST00000392597 THBS3P49746 956 aa16.52■□□□□ 0.24
PTPN11-202ENST00000392597 RPL31P62899 125 aaKnown RBP16.52■□□□□ 0.24
PTPN11-202ENST00000392597 C10orf91Q5T1B1 145 aa16.52■□□□□ 0.24
PTPN11-202ENST00000392597 CA5BP1Q8WTZ4 195 aa16.52■□□□□ 0.24
PTPN11-202ENST00000392597 PARD6GQ9BYG4 376 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-202ENST00000392597 SAA2-SAA4A0A096LPE2 208 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 IGHV1-69-2A0A0G2JMI3 117 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 ZG16O60844 167 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 METTL15P1P0C7V9 234 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 SAA2P0DJI9 122 aaPredicted RBP16.52■□□□□ 0.23
PTPN11-202ENST00000392597 NFYBP25208 207 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 SRSF3P84103 164 aaKnown RBP16.52■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF616Q08AN1 781 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 LRRC10Q5BKY1 277 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 SPANXN5Q5MJ07 72 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 SLC25A48Q6ZT89 311 aaKnown RBP16.52■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF525Q8N782 197 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 OR4S2Q8NH73 311 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 LEAP2Q969E1 77 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 TREM1Q9NP99 234 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 UQCC1Q9NVA1 299 aa16.52■□□□□ 0.23
PTPN11-202ENST00000392597 NDUFB3O43676 98 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 PLAUP00749 431 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 IGHV3-7P01780 117 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 CD5P06127 495 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 OR8U8P0C7N1 319 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 ERVK-16P61578 105 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 MRPS11P82912 194 aaKnown RBP16.51■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF672Q499Z4 452 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF251Q9BRH9 671 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 TMEM204Q9BSN7 226 aa16.51■□□□□ 0.23
PTPN11-202ENST00000392597 SIAH2O43255 324 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 FSTL3O95633 263 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 NQO2P16083 231 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 DVL1P1P54792 670 aaPredicted RBP16.5■□□□□ 0.23
PTPN11-202ENST00000392597 AKR1C1Q04828 323 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 UTF1Q5T230 341 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 PRAMEF5Q5TYX0 476 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 DPPA3Q6W0C5 159 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 HEPN1Q6WQI6 88 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 HAPLN4Q86UW8 402 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 LFNGQ8NES3 379 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 DTD1Q8TEA8 209 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 CARHSP1Q9Y2V2 147 aaKnown RBP16.5■□□□□ 0.23
PTPN11-202ENST00000392597 HCFC1P51610 2035 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 RNASEK-C17orf49H0YIS7 233 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 PPIHO43447 177 aaKnown RBP16.5■□□□□ 0.23
PTPN11-202ENST00000392597 SCAF4O95104 1147 aaKnown RBP16.5■□□□□ 0.23
PTPN11-202ENST00000392597 DAOP14920 347 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 SNCAP37840 140 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 FHITP49789 147 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 ARL16Q0P5N6 197 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 C4orf17Q53FE4 359 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 MUC15Q8N387 334 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 FAM213BQ8TBF2 198 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 SUN5Q8TC36 379 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF714Q96N38 554 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 HIPK2Q9H2X6 1198 aa16.5■□□□□ 0.23
PTPN11-202ENST00000392597 RBMXL2O75526 392 aaKnown RBP16.49■□□□□ 0.23
PTPN11-202ENST00000392597 MMP23AO75900 390 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 ZNF273Q14593 569 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 SLC25A24Q6NUK1 477 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 C1orf229Q6ZS94 237 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-202ENST00000392597 LYG1Q8N1E2 194 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 LILRB2Q8N423 598 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 OR52E5Q8NH55 327 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 SCGB1C1Q8TD33 95 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 SEC11CQ9BY50 192 aa16.49■□□□□ 0.23
PTPN11-202ENST00000392597 FCN3O75636 299 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 LOXP28300 417 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-202ENST00000392597 CDSNQ15517 529 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 ATP6V1FQ16864 119 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 HFEQ30201 348 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 PDLIM3Q53GG5 364 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-202ENST00000392597 TMEM200BQ69YZ2 307 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 RAB39BQ96DA2 213 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 PSMG3Q9BT73 122 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-202ENST00000392597 A0A1W2PPE3 182 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 OR9G9P0C7N8 305 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 ADCYAP1P18509 176 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 PPOXP50336 477 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 RUNX1Q01196 453 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 DEFA5Q01523 94 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 SLC38A11Q08AI6 406 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 AKR1C8PQ5T2L2 129 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 SVBPQ8N300 66 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 OR4C12Q96R67 309 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 MS4A7Q9GZW8 240 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-202ENST00000392597 FAM96BQ9Y3D0 163 aa16.48■□□□□ 0.23
PTPN11-202ENST00000392597 YLPM1P49750 1951 aaKnown RBP16.47■□□□□ 0.23
PTPN11-202ENST00000392597 BTBD17A6NE02 478 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 F8W036 122 aa16.47■□□□□ 0.23
PTPN11-202ENST00000392597 AGPAT2O15120 278 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms