RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 IGHV3-13P01766 116 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 IGHV3-7P01780 117 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 FCARP24071 287 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
CCDC50-201ENST00000392455 ACER2Q5QJU3 275 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 VGLL1Q99990 258 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 TUBA4BQ9H853 241 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 FLRT3Q9NZU0 649 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 DUX5Q96PT3 197 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 LINC00869P0C866 280 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 ERGP11308 486 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 CYB561D1Q8N8Q1 229 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 RHNO1Q9BSD3 238 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 CISD1Q9NZ45 108 aaKnown RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 OR2Y1Q8NGV0 311 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 THADAQ6YHU6 1953 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 RAE1P78406 368 aaKnown RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 R4GN57 208 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 V9GYH0 126 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 ATAD5Q96QE3 1844 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FFAR1O14842 300 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 SPNP16150 400 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 TRBV20OR9-2A0A075B6H5 130 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 RPL36A-HNRNPH2H7BZ11 118 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 PAX2Q02962 417 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 ATXN8Q156A1 80 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 CITED2Q99967 270 aaPredicted RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A10PA6NDY2 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A18PA6NE21 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A16PA6NEW6 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A20PA6NIJ5 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A8PA6NJQ4 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A7PA6NKC0 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A22PA8MWA6 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A12PA8MX19 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A5PA8MXJ8 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A23PA8MXZ1 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A15PP0C7V4 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A13PP0C7W8 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A14PP0C7W9 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 FAM90A24PP0C7X0 464 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 PSG6Q00889 435 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 VAX1Q5SQQ9 334 aa12.81□□□□□ -0.36
CCDC50-201ENST00000392455 MBNL2Q5VZF2 373 aaKnown RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 METTL1Q9UBP6 276 aaKnown RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 CNOT1A5YKK6 2376 aaKnown RBP12.81□□□□□ -0.36
CCDC50-201ENST00000392455 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 SPINK14Q6IE38 97 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 WFDC3Q8IUB2 231 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 DERL1Q9BUN8 251 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 TMSB15BA0A087X1C1 80 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 A0A0U1RQV5 110 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 OR2H1Q9GZK4 316 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 SDF2L1Q9HCN8 221 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 ASPDHA6ND91 283 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 RRHO14718 337 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 CACNA1EQ15878 2313 aa12.8□□□□□ -0.36
CCDC50-201ENST00000392455 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
CCDC50-201ENST00000392455 SRSF4Q08170 494 aaKnown RBP12.8□□□□□ -0.36
CCDC50-201ENST00000392455 MORN3Q6PF18 240 aaPredicted RBP12.8□□□□□ -0.36
CCDC50-201ENST00000392455 A0A1B0GTL3 188 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 hCG_38984A0A1B0GV85 526 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PSG2P11465 335 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 CKS1BP61024 79 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 LCN2P80188 198 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 FOXC2Q99958 501 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 TMEM160Q9NX00 188 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 FOXJ2Q9P0K8 574 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 C16orf97H3BN30 126 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 HOXB1P14653 301 aaPredicted RBP12.79□□□□□ -0.36
CCDC50-201ENST00000392455 CTLA4P16410 223 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 P2RY6Q15077 328 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 TRIP6Q15654 476 aaKnown RBP12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PCSK4Q6UW60 755 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PGLYRP4Q96LB8 373 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PF4P02776 101 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 NPPCP23582 126 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 RPS11P62280 158 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC50-201ENST00000392455 OR5AN1Q8NGI8 311 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 F11RQ9Y624 299 aaKnown RBP12.79□□□□□ -0.36
CCDC50-201ENST00000392455 F8WEM9 126 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 TSPAN2O60636 221 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 TDGF1P13385 188 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PGPEP1LA6NFU8 196 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.79□□□□□ -0.36
CCDC50-201ENST00000392455 GCM2O75603 506 aaPredicted RBP12.79□□□□□ -0.36
CCDC50-201ENST00000392455 UCP2P55851 309 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 ACACAQ13085 2346 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 PRSS41Q7RTY9 318 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 NTMQ9P121 344 aa12.79□□□□□ -0.36
CCDC50-201ENST00000392455 C8orf88P0DMB2 117 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 EDA2RQ9HAV5 297 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 EML2O95834 649 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 ATP6V0CP27449 155 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms