RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 LGALS1P09382 135 aaKnown RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 STAG3L2P0CL84 134 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 NQO2P16083 231 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 SRMP19623 302 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 NFYAP23511 347 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 MSNP26038 577 aaKnown RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 OR10J1P30954 320 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 HSPA9P38646 679 aaKnown RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CDK9P50750 372 aaKnown RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 RAB14P61106 215 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TBPL1P62380 186 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 MGAT3Q09327 533 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TMEM267Q0VDI3 215 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 C6orf183Q5T699 404 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 SPATA12Q7Z6I5 190 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 LRRC6Q86X45 466 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 DHFR2Q86XF0 187 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 LRRC34Q8IZ02 419 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 Q8N6K4 173 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TNFAIP8L1Q8WVP5 186 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 ASB13Q8WXK3 278 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 AQP3Q92482 292 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CIDECQ96AQ7 238 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 LRRC39Q96DD0 335 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 IFT46Q9NQC8 304 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 RMND1Q9NWS8 449 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 EMC3Q9P0I2 261 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 KLK9Q9UKQ9 250 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 BZW2Q9Y6E2 419 aaKnown RBP-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 NAV3Q8IVL0 2385 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 MED12Q93074 2177 aa-0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 MYO15BQ96JP2 1530 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 SETD5Q9C0A6 1442 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 FLT4P35916 1363 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 A0A087WUU8 490 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 LOC110117498A0A087WWA1 95 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 RAB19A4D1S5 217 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 TMEM212A6NML5 194 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 IBA57-AS1B1ANH7 110 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 H0YIV9 168 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 H3BT86 120 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 MRASO14807 208 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 NCR3O14931 201 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 SLC22A1O15245 554 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 KDELR3O43731 214 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 OR2T1O43869 369 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 SHOX2O60902 331 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 PPBPP02775 128 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 MSMBP08118 114 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 CCNOP22674 350 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 BRS3P32247 399 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 RPL28P46779 137 aaKnown RBP-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 UBE2KP61086 200 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 HERVK_113P63121 156 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 DMTNQ08495 405 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 ASCL4Q6XD76 172 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 Q6ZT83 130 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 ATP5L2Q7Z4Y8 100 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 C17orf78Q8N4C9 275 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 Q8N814 137 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 OR52K2Q8NGK3 314 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 OR4A15Q8NGL6 344 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 MITD1Q8WV92 249 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 ACOT12Q8WYK0 555 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 TLCD1Q96CP7 247 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 SFRP2Q96HF1 295 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 OBSCN-AS1Q96MR7 158 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 NMNAT3Q96T66 252 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 OR51B6Q9H340 312 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 FBXO44Q9H4M3 255 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 NCOR1P1Q9H4R4 102 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 XAGE1AQ9HD64 81 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 ZNHIT6Q9NWK9 470 aaKnown RBP-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 NAT8Q9UHE5 227 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 CFAP45Q9UL16 551 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 PSME2Q9UL46 239 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 RABL2BQ9UNT1 228 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 ZFP30Q9Y2G7 519 aa-0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 DNMT1P26358 1616 aaKnown RBP-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 NEMFO60524 1076 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 HYPMO75409 117 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 PMP2P02689 132 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 TUBG1P23258 451 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 ADORA1P30542 326 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 SLCO1A2P46721 670 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 DAPP51397 102 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 AQP5P55064 265 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM33P57088 247 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 LINC00313P59037 77 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 FKBP1AP62942 108 aaKnown RBP-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 CLEC12BQ2HXU8 276 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM249Q2WGJ8 235 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 GDF5OSQ5U4N7 250 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 AAED1Q7RTV5 226 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 AGR3Q8TD06 166 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 Q8WTZ3 238 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM239Q8WW34 195 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 BORCS5Q969J3 196 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM70Q9BUB7 260 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 TUBG2Q9NRH3 451 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms