RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GNB1P62873 340 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 DOLPP1Q86YN1 238 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 SMRP1Q8NCR6 262 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 RNF2Q99496 336 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 CHRNA10Q9GZZ6 450 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 CRYBB3P26998 211 aa12.15□□□□□ -0.47
RTF1-201ENST00000389629 ADMP35318 185 aa12.15□□□□□ -0.47
RTF1-201ENST00000389629 ID3Q02535 119 aa12.15□□□□□ -0.47
RTF1-201ENST00000389629 IBA57Q5T440 356 aaKnown RBP12.15□□□□□ -0.47
RTF1-201ENST00000389629 IL19Q9UHD0 177 aa12.15□□□□□ -0.47
RTF1-201ENST00000389629 ZNF891A8MT65 544 aaPredicted RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 S1PR2O95136 353 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 MT-ND6P03923 174 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 ORM2P19652 201 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 OPRK1P41145 380 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 TMEM56Q96MV1 263 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 TMEM56-RWDD3S4R434 201 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 SYNGR3O43761 229 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 NAPSAO96009 420 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 CEBPDP49716 269 aaPredicted RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 RPL31P62899 125 aaKnown RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 SSBP3Q9BWW4 388 aaPredicted RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 SEMA5BQ9P283 1151 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 COL4A3Q01955 1670 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 TEX50A0A1B0GTY4 177 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A10PA6NDY2 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A18PA6NE21 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A16PA6NEW6 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A20PA6NIJ5 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A8PA6NJQ4 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A7PA6NKC0 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 IFITM10A6NMD0 228 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A22PA8MWA6 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A12PA8MX19 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A5PA8MXJ8 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A23PA8MXZ1 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A15PP0C7V4 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A13PP0C7W8 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A14PP0C7W9 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 FAM90A24PP0C7X0 464 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 NPY1RP25929 384 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 SPSB3Q6PJ21 355 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 EGLN1Q9GZT9 426 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 HES4Q9HCC6 221 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 LAMTOR2Q9Y2Q5 125 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 hCG_38984A0A1B0GV85 526 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 K7EQM0 130 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 MAP1LC3CQ9BXW4 147 aa12.14□□□□□ -0.47
RTF1-201ENST00000389629 KLF13Q9Y2Y9 288 aaPredicted RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 CHCHD2Q9Y6H1 151 aaPredicted RBP12.14□□□□□ -0.47
RTF1-201ENST00000389629 ZNF318Q5VUA4 2279 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 LYZL6O75951 148 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 GMPPAQ96IJ6 420 aaPredicted RBP12.13□□□□□ -0.47
RTF1-201ENST00000389629 TWSG1Q9GZX9 223 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 NEURL1O76050 574 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 PPOXP50336 477 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 SPEM2Q0P670 501 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 PMCHL1Q16048 86 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
RTF1-201ENST00000389629 GBGT1Q8N5D6 347 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 DRAM1Q8N682 238 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 NFAM1Q8NET5 270 aaPredicted RBP12.13□□□□□ -0.47
RTF1-201ENST00000389629 OR2H2O95918 312 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 CYC1P08574 325 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 TMEM242Q9NWH2 141 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 IGKV1-12A0A0C4DH73 117 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 OOEPA6NGQ2 149 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 IGKV1D-12P01611 117 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 C1orf194Q5T5A4 169 aa12.13□□□□□ -0.47
RTF1-201ENST00000389629 LSM10Q969L4 123 aaKnown RBP12.13□□□□□ -0.47
RTF1-201ENST00000389629 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
RTF1-201ENST00000389629 A0A1B0GW64 132 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 C3orf80F5H4A9 247 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 SELLP14151 372 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 MAGEA5P43359 124 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 ZNF718Q3SXZ3 478 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 TEX38Q6PEX7 206 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 NPVFQ9HCQ7 196 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 LRTM2Q8N967 370 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 FAM131CQ96AQ9 280 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 SPTA1P02549 2419 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 IGHV1-45A0A0A0MS14 117 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 HLA-DQA1P01909 254 aa12.12□□□□□ -0.47
RTF1-201ENST00000389629 RNPS1Q15287 305 aaKnown RBP12.12□□□□□ -0.47
RTF1-201ENST00000389629 ABHD12Q8N2K0 398 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms