RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 DEGS1O15121 323 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 CTXN2P0C2S0 81 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 DEFA4P12838 97 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 IER3P46695 156 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 FUT6P51993 359 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 FOXL2NBQ6ZUU3 175 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 PNKDQ8N490 385 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 OR56B2PQ8NGI1 322 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 KCNIP2Q9NS61 270 aa12.37□□□□□ -0.43
VPS9D1-201ENST00000389386 SCRG1O75711 98 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 THBS3P49746 956 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 C10orf128Q5T292 105 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 WDR74Q6RFH5 385 aaPredicted RBP12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 TMPRSS7Q7RTY8 843 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 RDH5Q92781 318 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 OR5B21A6NL26 309 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 CRYGSP22914 178 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 LGALS4P56470 323 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 OR4F17Q8NGA8 305 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 OCC1Q8TAD7 63 aa12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 MRPL27Q9P0M9 148 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-201ENST00000389386 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 ADAMTS20P59510 1910 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 KIR2DS1A0A191URI9 304 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 A0A1W2PRS3 328 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 SNURFLB1AK76 121 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 REG1AP05451 166 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 KIR2DS4P43632 304 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 ZNF83P51522 516 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 KIR2DS1Q14954 304 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 ZNF324BQ6AW86 544 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 NIT1Q86X76 327 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 TMEM147Q9BVK8 224 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 ATP23Q9Y6H3 246 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 PMCHP20382 165 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 GFRA1P56159 465 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 TFF3Q07654 80 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 ANKRD37Q7Z713 158 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 OR1L1Q8NH94 360 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 KCNS1Q96KK3 526 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 SGCZQ96LD1 299 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 OCIAD1Q9NX40 245 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 CLN8Q9UBY8 286 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 U3KQA8 63 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 URB1O60287 2271 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 AHCTF1Q8WYP5 2266 aa12.35□□□□□ -0.43
VPS9D1-201ENST00000389386 A6NJY4 79 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 SLC17A3O00476 420 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 RHBDD2Q6NTF9 364 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 SFXN3Q9BWM7 321 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 R4GN57 208 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 IGHV5-10-1A0A0J9YXX1 117 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 CLDN1O95832 211 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 ATOH7Q8N100 152 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 MUC15Q8N387 334 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 ZNF611Q8N823 705 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 NPCDR1Q9BY65 106 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 GNB1LQ9BYB4 327 aa12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 TNRC6BQ9UPQ9 1833 aaKnown RBP12.34□□□□□ -0.43
VPS9D1-201ENST00000389386 TRBV9A0A0B4J1U6 114 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 RNF212BA8MTL3 300 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 OR10J3Q5JRS4 329 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 Q5PR19 223 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 SF3B5Q9BWJ5 86 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 ERRFI1Q9UJM3 462 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 DHHO43323 396 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 SP9P0CG40 484 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 PSG1P11464 419 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 ARG2P78540 354 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 TMEM249Q2WGJ8 235 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms