RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 BTN3A2P78410 334 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 TMEM267Q0VDI3 215 aaPredicted RBP0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 C1DQ13901 141 aaKnown RBP0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 LCN8Q6JVE9 175 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 KTN1-AS1Q86SY8 53 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 CNPY4Q8N129 248 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 DYNAPQ8N1N2 210 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 LFNGQ8NES3 379 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 OR1L8Q8NGR8 309 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 CYGBQ8WWM9 190 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 MS4A6EQ96DS6 147 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 TMEM56Q96MV1 263 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 ODF3Q96PU9 254 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 PEAK1Q9H792 1746 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 CACNA1EQ15878 2313 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 RIMS2Q9UQ26 1411 aa0.2□□□□□ -2.38
RNU6-541P-201ENST00000384709 ALPK3Q96L96 1907 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 IGKV2D-26A0A0A0MRZ7 120 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 IGHV1-18A0A0C4DH31 117 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 COPEO14579 308 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 UBE2L6O14933 153 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 HBZP02008 142 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 RPSAP08865 295 aaKnown RBP0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 GABRA2P47869 451 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 EMP1P54849 157 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 TNNC1P63316 161 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 STX3Q13277 289 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 MOGQ16653 247 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 MIAQ16674 131 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 CLEC12BQ2HXU8 276 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 FBXO48Q5FWF7 155 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 SPATA31B1PQ5VZV4 182 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 XKRXQ6PP77 449 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 COPS6Q7L5N1 327 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 DCXRQ7Z4W1 244 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 DAND5Q8N907 189 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 C9orf163Q8N9P6 203 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 OR51T1Q8NGJ9 327 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 CCDC124Q96CT7 223 aaKnown RBP0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 SMIM12Q96EX1 92 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 EMC3Q9P0I2 261 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 C22orf24Q9Y442 160 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 ASCC3Q8N3C0 2202 aaKnown RBP0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 DOCK3Q8IZD9 2030 aa0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 HEATR1Q9H583 2144 aaKnown RBP0.19□□□□□ -2.38
RNU6-541P-201ENST00000384709 MAST4O15021 2626 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 SBF1O95248 1867 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 MAP3K19Q56UN5 1328 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 OR6C6A6NF89 314 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 OR51F1A6NGY5 319 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 C9JCJ5 164 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 M0R381 172 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 MPZL2O60487 215 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 MT-CO2P00403 227 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 CRPP02741 224 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ATP5G1P05496 136 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 CCDC172P0C7W6 258 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 PSMB8P28062 276 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 MIPP30301 263 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ALDH3A1P30838 453 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 SYCP1Q15431 976 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ARHGAP11BQ3KRB8 267 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 SLC36A2Q495M3 483 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 C7orf65Q6ZTY9 151 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 SLC13A5Q86YT5 568 aaPredicted RBP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 C1orf174Q8IYL3 243 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 C15orf53Q8NAA6 179 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ZNF675Q8TD23 568 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 CCDC12Q8WUD4 166 aaPredicted RBP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 TLCD1Q96CP7 247 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ZNF514Q96K75 400 aaPredicted RBP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 TAAR3PQ9P1P4 343 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 POLR3HQ9Y535 204 aaPredicted RBP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 RBM7Q9Y580 266 aaKnown RBP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ZNF106Q9H2Y7 1883 aaKnown RBP0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 ZNF462Q96JM2 2506 aa0.18□□□□□ -2.38
RNU6-541P-201ENST00000384709 TRAV7A0A075B6U4 112 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 TRAV8-1A0A0A6YYK1 113 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 A0A0J9YW62 118 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 A0A1B0GW54 56 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 HMSDA8MTL9 139 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 MRASO14807 208 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 ARL6IP5O75915 188 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 APOA1P02647 267 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 CFL1P23528 166 aaKnown RBP0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 CA5AP35218 305 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 NUP62P37198 522 aaPredicted RBP0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 PSMD7P51665 324 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 TPI1P60174 286 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 TBPL1P62380 186 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 GNA12Q03113 381 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 EIF4G1Q04637 1599 aaKnown RBP0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 NUP160Q12769 1436 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 CDK5R1Q15078 307 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 ELOBQ15370 118 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 ACSM3Q53FZ2 586 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 TMEM31Q5JXX7 168 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 LRRC34Q8IZ02 419 aa0.17□□□□□ -2.38
RNU6-541P-201ENST00000384709 STOML3Q8TAV4 291 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms