RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
CLCN4-201ENST00000380829 SMDT1Q9H4I9 107 aa11.93□□□□□ -0.5
CLCN4-201ENST00000380829 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
CLCN4-201ENST00000380829 ADGRG4Q8IZF6 3080 aa11.93□□□□□ -0.5
CLCN4-201ENST00000380829 TMEM30CPA0ZSE6 113 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 NPIPB11E5RHQ5 1161 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 SPRY3O43610 288 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 IGHV3-13P01766 116 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 GABRA2P47869 451 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 OR3A1P47881 315 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 RAB11AP62491 216 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 RPL23AP62750 156 aaKnown RBP11.92□□□□□ -0.5
CLCN4-201ENST00000380829 MRPS11P82912 194 aaKnown RBP11.92□□□□□ -0.5
CLCN4-201ENST00000380829 RUNX1Q01196 453 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 PMS2P11Q13670 270 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 FAM53AQ6NSI3 398 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-201ENST00000380829 NECAP1Q8NC96 275 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 OR1L1Q8NH94 360 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 COQ2Q96H96 371 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 OR2V2Q96R30 315 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 TMEM238LA0A1B0GVL6 79 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 CDS2O95674 445 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 UCP1P25874 307 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLCN4-201ENST00000380829 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 ICE1Q9Y2F5 2266 aa11.92□□□□□ -0.5
CLCN4-201ENST00000380829 C12orf77C9JDV5 145 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 H0Y980 276 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.91□□□□□ -0.5
CLCN4-201ENST00000380829 CLDN34H7C241 214 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 ADAM20O43506 726 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 GCGP01275 180 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
CLCN4-201ENST00000380829 RPLP1P05386 114 aaKnown RBP11.91□□□□□ -0.5
CLCN4-201ENST00000380829 F2RP25116 425 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 RPP30P78346 268 aaKnown RBP11.91□□□□□ -0.5
CLCN4-201ENST00000380829 CLEC12BQ2HXU8 276 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 MRGPRGQ86SM5 289 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 CD177Q8N6Q3 437 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 CLDND2Q8NHS1 167 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 MRGPRDQ8TDS7 321 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 PCNX1Q96RV3 2341 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 A0A1B0GU03 582 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 FAM24AA6NFZ4 105 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 ST8SIA3O43173 380 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 NXPH3O95157 252 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 CD40P25942 277 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 RND2P52198 227 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 MZT1Q08AG7 82 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 PRSS8Q16651 343 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 C3orf36Q3SXR2 165 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 ZNF506Q5JVG8 444 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 MOGAT3Q86VF5 341 aa11.91□□□□□ -0.5
CLCN4-201ENST00000380829 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
CLCN4-201ENST00000380829 IGHV3OR15-7A0A075B7D8 119 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 PSG2P11465 335 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 S100GP29377 79 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 ERVFC1-1P60608 527 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 ARSJQ5FYB0 599 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-201ENST00000380829 FAM90A2PQ658T7 463 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 SLC35E4Q6ICL7 350 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 TLN1Q9Y490 2541 aaKnown RBP11.9□□□□□ -0.5
CLCN4-201ENST00000380829 CYB5R3P00387 301 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-201ENST00000380829 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-201ENST00000380829 EDDM3AQ14507 147 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 GPR157Q5UAW9 335 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 WFDC8Q8IUA0 241 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 OR52L2PQ8NGH6 319 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 OR5D13Q8NGL4 314 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 ITLN1Q8WWA0 313 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 GNG13Q9P2W3 67 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 RAXQ9Y2V3 346 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 POLR3KQ9Y2Y1 108 aaPredicted RBP11.9□□□□□ -0.5
CLCN4-201ENST00000380829 NCOR2Q9Y618 2525 aa11.9□□□□□ -0.5
CLCN4-201ENST00000380829 PLCE1Q9P212 2302 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 IGLV3-9A0A075B6K5 115 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 IGSF23A1L1A6 192 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 SRRM5B3KS81 715 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 C16orf97H3BN30 126 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 HBZP02008 142 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
CLCN4-201ENST00000380829 EPHA1P21709 976 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 PRDX2P32119 198 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 SSTR5P35346 364 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 HNF4GQ14541 408 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 GNMTQ14749 295 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 NMSQ5H8A3 153 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
CLCN4-201ENST00000380829 GCSAMQ8N6F7 178 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 GALMQ96C23 342 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
CLCN4-201ENST00000380829 MAGT1Q9H0U3 335 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms