RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SAP30LQ9HAJ7 183 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 LINC00312Q9Y6C7 94 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 SMG1Q96Q15 3661 aaKnown RBP19.1■□□□□ 0.65
VPS16-201ENST00000380443 FCGR3BO75015 233 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 ZNF134P52741 427 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 CCL8P80075 99 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 ARL16Q0P5N6 197 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 DEFB108BQ8NET1 73 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 WDR61Q9GZS3 305 aaKnown RBP19.09■□□□□ 0.65
VPS16-201ENST00000380443 MS4A5Q9H3V2 200 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 ATRXP46100 2492 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 TRGV8A0A0C4DH27 118 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 NQO2P16083 231 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 CA7P43166 264 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 RPP30P78346 268 aaKnown RBP19.09■□□□□ 0.65
VPS16-201ENST00000380443 RUNX1Q01196 453 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 PDLIM3Q53GG5 364 aaPredicted RBP19.09■□□□□ 0.65
VPS16-201ENST00000380443 SPSB3Q6PJ21 355 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 OR4S2Q8NH73 311 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 SLC35B3Q9H1N7 401 aa19.09■□□□□ 0.65
VPS16-201ENST00000380443 DYSFO75923 2080 aa19.08■□□□□ 0.65
VPS16-201ENST00000380443 C9JQL5 133 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 RBMXL2O75526 392 aaKnown RBP19.08■□□□□ 0.64
VPS16-201ENST00000380443 SELLP14151 372 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 CT45A1Q5HYN5 189 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 ADAM5Q6NVV9 412 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 CENPVQ7Z7K6 275 aaPredicted RBP19.08■□□□□ 0.64
VPS16-201ENST00000380443 ST6GALNAC3Q8NDV1 305 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 CT45A3Q8NHU0 189 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 DDB2Q92466 427 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 RNASE6Q93091 150 aaKnown RBP19.08■□□□□ 0.64
VPS16-201ENST00000380443 GAL3ST2Q9H3Q3 398 aa19.08■□□□□ 0.64
VPS16-201ENST00000380443 UNKLQ9H9P5 680 aaKnown RBP19.08■□□□□ 0.64
VPS16-201ENST00000380443 DSCAMO60469 2012 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 PPIAL4EA0A075B759 164 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 SHISA9B4DS77 424 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 PPIAL4DF5H284 164 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 TMEM178BH3BS89 294 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 ZG16O60844 167 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 PPIAL4FP0DN26 164 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 PPT1P50897 306 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 SPCS3P61009 180 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 GNB2P62879 340 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 EFNB3Q15768 340 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 ZNF439Q8NDP4 499 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 OR4C12Q96R67 309 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 TMEM147Q9BVK8 224 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 FBXO7Q9Y3I1 522 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 PPIAL4AQ9Y536 164 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 USF3Q68DE3 2245 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 TLN1Q9Y490 2541 aaKnown RBP19.07■□□□□ 0.64
VPS16-201ENST00000380443 LOC105371267A0A1B0GV96 52 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 MEX3AA1L020 520 aaKnown RBP19.07■□□□□ 0.64
VPS16-201ENST00000380443 FAM74A7A6NL05 159 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 CEBPZOSA8MTT3 80 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 FAM74A3Q4VXF1 159 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 FAM216BQ8N7L0 139 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 CLRN3Q8NCR9 226 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 OR10P1Q8NGE3 313 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 CLCC1Q96S66 551 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 NDRG3Q9UGV2 375 aa19.07■□□□□ 0.64
VPS16-201ENST00000380443 RPUSD1Q9UJJ7 312 aaKnown RBP19.07■□□□□ 0.64
VPS16-201ENST00000380443 RBFOX3A6NFN3 312 aa19.06■□□□□ 0.64
VPS16-201ENST00000380443 APOBEC3AP31941 199 aaPredicted RBP19.06■□□□□ 0.64
VPS16-201ENST00000380443 RPL39P5Q59GN2 51 aa19.06■□□□□ 0.64
VPS16-201ENST00000380443 TCF23Q7RTU1 214 aa19.06■□□□□ 0.64
VPS16-201ENST00000380443 OR4A16Q8NH70 328 aa19.06■□□□□ 0.64
VPS16-201ENST00000380443 TAF15Q92804 592 aaKnown RBP eCLIP19.06■□□□□ 0.64
VPS16-201ENST00000380443 B9A039 149 aa19.05■□□□□ 0.64
VPS16-201ENST00000380443 CD3EP07766 207 aa19.05■□□□□ 0.64
VPS16-201ENST00000380443 MRPS11P82912 194 aaKnown RBP19.05■□□□□ 0.64
VPS16-201ENST00000380443 PRAMEF5Q5TYX0 476 aa19.05■□□□□ 0.64
VPS16-201ENST00000380443 MBD3L1Q8WWY6 194 aa19.05■□□□□ 0.64
VPS16-201ENST00000380443 SLC25A10Q9UBX3 287 aaPredicted RBP19.05■□□□□ 0.64
VPS16-201ENST00000380443 DSCAML1Q8TD84 2053 aa19.05■□□□□ 0.64
VPS16-201ENST00000380443 PMS2P5A8MQ11 134 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 E7EQL1 145 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 TMPRSS2O15393 492 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 CHRNB4P30926 498 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 ZNF429Q86V71 674 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 TMEM106BQ9NUM4 274 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 RFNGQ9Y644 331 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 SLC31A2O15432 143 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 NDUFA2O43678 99 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 DAOP14920 347 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 NPBWR1P48145 328 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 VWC2Q2TAL6 325 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 DUX4L9Q6RFH8 374 aaPredicted RBP19.04■□□□□ 0.64
VPS16-201ENST00000380443 SLC25A48Q6ZT89 311 aaKnown RBP19.04■□□□□ 0.64
VPS16-201ENST00000380443 SFT2D1Q8WV19 159 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 RAB39BQ96DA2 213 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 PLPPR2Q96GM1 343 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 DYNLRB1Q9NP97 96 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 TANC2Q9HCD6 1990 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 PLCE1Q9P212 2302 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 COL6A6A6NMZ7 2263 aa19.04■□□□□ 0.64
VPS16-201ENST00000380443 TNFRSF13BO14836 293 aaPredicted RBP19.03■□□□□ 0.64
VPS16-201ENST00000380443 NUPL2O15504 423 aaKnown RBP19.03■□□□□ 0.64
VPS16-201ENST00000380443 SOX15O60248 233 aa19.03■□□□□ 0.64
VPS16-201ENST00000380443 MBP02144 154 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms