RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PRRG2O14669 202 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 IRF2P14316 349 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 SSTR5P35346 364 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 CCL8P80075 99 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 C5orf47Q569G3 176 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM211Q6ICI0 200 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 ASCL4Q6XD76 172 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 Q6ZS92 163 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 PLK3Q9H4B4 646 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 RAB18Q9NP72 206 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 MEMO1Q9Y316 297 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 FAM208BQ5VWN6 2430 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 TRGV8A0A0C4DH27 118 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 A0A0D9SG52 128 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 E5RGE8 158 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 MPPED1O15442 326 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 SSSCA1O60232 199 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 HAND1O96004 215 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 CD8AP01732 235 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 CKS1BP61024 79 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 CYCSP99999 105 aaKnown RBP9.09□□□□□ -0.95
NEDD9-201ENST00000379433 ZNRF1Q8ND25 227 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 OR1L1Q8NH94 360 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 MRPL30Q8TCC3 161 aaKnown RBP9.09□□□□□ -0.95
NEDD9-201ENST00000379433 LEAP2Q969E1 77 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 GP6Q9HCN6 339 aa9.09□□□□□ -0.95
NEDD9-201ENST00000379433 TRDCB7Z8K6 153 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 GPR31O00270 319 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 SH2D1BO14796 132 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 CST7O76096 145 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 FGF2P09038 288 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 IL2RGP31785 369 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 GLIPR1P48060 266 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 ADAM5Q6NVV9 412 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 LDLRAD3Q86YD5 345 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 SVBPQ8N300 66 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 OR52L2PQ8NGH6 319 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 SNRNP40Q96DI7 357 aaKnown RBP9.08□□□□□ -0.96
NEDD9-201ENST00000379433 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 POLDIP2Q9Y2S7 368 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 FBXO7Q9Y3I1 522 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 MYO18BQ8IUG5 2567 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-201ENST00000379433 CCL25O15444 150 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 BCL2L11O43521 198 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 PEA15Q15121 130 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 CXorf66Q5JRM2 361 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-201ENST00000379433 DHRS11Q6UWP2 260 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 CMTM1Q8IZ96 169 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 KCNRGQ8N5I3 272 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 OR8G5Q8NG78 346 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 OR2V2Q96R30 315 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 ANAPC10Q9UM13 185 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 IGKV3-15P01624 115 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 SERPINE2P07093 398 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 RPL12P30050 165 aaKnown RBP9.08□□□□□ -0.96
NEDD9-201ENST00000379433 PPP1CCP36873 323 aaKnown RBP9.08□□□□□ -0.96
NEDD9-201ENST00000379433 ERVFRD-1P60508 538 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 GNMTQ14749 295 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 SPINK9Q5DT21 86 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 MOB3AQ96BX8 217 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 IL36GQ9NZH8 169 aa9.08□□□□□ -0.96
NEDD9-201ENST00000379433 LRP5LA4QPB2 252 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 OR2F2O95006 317 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 YIF1AO95070 293 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 PSG2P11465 335 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 OR2F1Q13607 317 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 TMEM187Q14656 261 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 BSXQ3C1V8 233 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 UBTD1Q9HAC8 227 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 KIR2DS1A0A191URI9 304 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 C1QL1O75973 258 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 KIR2DS4P43632 304 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 CD81P60033 236 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 COL10A1Q03692 680 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 ZNF816Q0VGE8 651 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-201ENST00000379433 KIR2DS1Q14954 304 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 OCIAD2Q56VL3 154 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 HSD17B13Q7Z5P4 300 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-201ENST00000379433 DOLPP1Q86YN1 238 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 DUX5Q96PT3 197 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 NMES1Q9C002 83 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 CBLN4Q9NTU7 201 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 TAAR3PQ9P1P4 343 aa9.07□□□□□ -0.96
NEDD9-201ENST00000379433 RCC2Q9P258 522 aaKnown RBP9.07□□□□□ -0.96
NEDD9-201ENST00000379433 A0A1B0GW55 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 FAM24AA6NFZ4 105 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 H0Y980 276 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 NAPSAO96009 420 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 MPZP25189 248 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 MPV17LQ2QL34 196 aa9.06□□□□□ -0.96
NEDD9-201ENST00000379433 DUX4L9Q6RFH8 374 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms