RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 EFNB3Q15768 340 aa16.11■□□□□ 0.17
SSU72-204ENST00000378726 ZNF788Q6ZQV5 615 aa16.11■□□□□ 0.17
SSU72-204ENST00000378726 TMEM217Q8N7C4 229 aa16.11■□□□□ 0.17
SSU72-204ENST00000378726 CCL17Q92583 94 aa16.11■□□□□ 0.17
SSU72-204ENST00000378726 GAFA1Q96PS6 74 aa16.11■□□□□ 0.17
SSU72-204ENST00000378726 SMDT1Q9H4I9 107 aa16.11■□□□□ 0.17
SSU72-204ENST00000378726 DSCAMO60469 2012 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 TRBV23-1A0A0A0MS06 115 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 SRP19P09132 144 aaKnown RBP16.1■□□□□ 0.17
SSU72-204ENST00000378726 RUNX1Q01196 453 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 LTC4SQ16873 150 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 C1QL4Q86Z23 238 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 RAB39BQ96DA2 213 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 SLC25A31Q9H0C2 315 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 DMRT1Q9Y5R6 373 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 DEFB108AA8MXU0 73 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 SERPINE2P07093 398 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 SP5Q6BEB4 398 aaPredicted RBP16.1■□□□□ 0.17
SSU72-204ENST00000378726 ZNF645Q8N7E2 425 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 SPIN2AQ99865 258 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 SPIN2BQ9BPZ2 258 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 OR6C3Q9NZP0 311 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 MMP24Q9Y5R2 645 aa16.1■□□□□ 0.17
SSU72-204ENST00000378726 ZNF729A6NN14 1252 aaPredicted RBP16.09■□□□□ 0.17
SSU72-204ENST00000378726 WNT2P09544 360 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 RPS10P46783 165 aaKnown RBP16.09■□□□□ 0.17
SSU72-204ENST00000378726 TFF3Q07654 80 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 C1orf87Q8N0U7 546 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 IL22RA2Q969J5 263 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 OR2D2Q9H210 308 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 NCOR1P1Q9H4R4 102 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 ANKHD1Q8IWZ3 2542 aaKnown RBP16.09■□□□□ 0.17
SSU72-204ENST00000378726 TRAV38-1A0A0B4J264 116 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 DUXBA0A1W2PPF3 345 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 TMEM178BH3BS89 294 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 ZNF16P17020 682 aaPredicted RBP16.09■□□□□ 0.17
SSU72-204ENST00000378726 VDAC1P21796 283 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 RAB2AP61019 212 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 ICAM4Q14773 271 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 NMSQ5H8A3 153 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 FAM216BQ8N7L0 139 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 FAM234AQ9H0X4 552 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 TMEM106BQ9NUM4 274 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 KIAA1456Q9P272 454 aa16.09■□□□□ 0.17
SSU72-204ENST00000378726 PPIAL4EA0A075B759 164 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 PPIAL4DF5H284 164 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 PPIAL4FP0DN26 164 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 TAGLN2P37802 199 aaKnown RBP16.08■□□□□ 0.16
SSU72-204ENST00000378726 ID3Q02535 119 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 ZNF343Q6P1L6 599 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 MUC15Q8N387 334 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 ZBTB34Q8NCN2 500 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 PPIAL4AQ9Y536 164 aa16.08■□□□□ 0.16
SSU72-204ENST00000378726 TMPRSS2O15393 492 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 CHST1O43916 411 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 YIF1AO95070 293 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 SCAF4O95104 1147 aaKnown RBP16.07■□□□□ 0.16
SSU72-204ENST00000378726 GGACTQ9BVM4 153 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 CLEC18AA5D8T8 446 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 PLA2G5P39877 138 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 UBE2KP61086 200 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 KIAA0141Q14154 515 aaPredicted RBP16.07■□□□□ 0.16
SSU72-204ENST00000378726 ZNF672Q499Z4 452 aaPredicted RBP16.07■□□□□ 0.16
SSU72-204ENST00000378726 OR2B11Q5JQS5 317 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 ZNF808Q8N4W9 903 aaPredicted RBP16.07■□□□□ 0.16
SSU72-204ENST00000378726 CYB561D1Q8N8Q1 229 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 CLEC18CQ8NCF0 446 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 GNG12Q9UBI6 72 aa16.07■□□□□ 0.16
SSU72-204ENST00000378726 BTBD17A6NE02 478 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 NDUFS6O75380 124 aaKnown RBP16.06■□□□□ 0.16
SSU72-204ENST00000378726 CXCL1P09341 107 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 CGB3P0DN86 165 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 CGB7P0DN87 165 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 FOSL1P15407 271 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 PAX9P55771 341 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 DLK1P80370 383 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 MORN2Q502X0 79 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 ZNF429Q86V71 674 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 ABHD14BQ96IU4 210 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 LIN7CQ9NUP9 197 aaKnown RBP16.06■□□□□ 0.16
SSU72-204ENST00000378726 CALYQ9NYX4 217 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 RNF212BA8MTL3 300 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 GNLYP22749 145 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 LOXP28300 417 aaPredicted RBP16.06■□□□□ 0.16
SSU72-204ENST00000378726 UQCRFS1P47985 274 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 ZNF585BQ52M93 769 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 Q8WTZ3 238 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 UNKLQ9H9P5 680 aaKnown RBP16.06■□□□□ 0.16
SSU72-204ENST00000378726 JPT1Q9UK76 154 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 PSG11Q9UQ72 335 aa16.06■□□□□ 0.16
SSU72-204ENST00000378726 TRGV10A0A0A0MS01 117 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 PIGBOS1A0A0B4J2F0 54 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 IFITM10A6NMD0 228 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 F2RL2O00254 374 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 ST8SIA5O15466 376 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 HOXA5P20719 270 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 ELOBQ15370 118 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 C17orf58Q2M2W7 97 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 ZNF506Q5JVG8 444 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 AKR1C8PQ5T2L2 129 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms