RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TRAV14DV4A0A0A6YYC5 116 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 DNASE2O00115 360 aaPredicted RBP7.2□□□□□ -1.26
VPS36-201ENST00000378060 KLK10O43240 276 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 GNG7O60262 68 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 HIST1H1BP16401 226 aaKnown RBP7.2□□□□□ -1.26
VPS36-201ENST00000378060 ATP5IP56385 69 aaPredicted RBP7.2□□□□□ -1.26
VPS36-201ENST00000378060 OR2D3Q8NGH3 330 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 RASL11BQ9BPW5 248 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 PAXXQ9BUH6 204 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 ABHD14AQ9BUJ0 271 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 IL17BQ9UHF5 180 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 PI4KAP42356 2102 aa7.2□□□□□ -1.26
VPS36-201ENST00000378060 IGKV3D-11A0A0A0MRZ8 115 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 TRGC1P0CF51 173 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 SPINK2P20155 84 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 MPZP25189 248 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
VPS36-201ENST00000378060 ID4P47928 161 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 PPOXP50336 477 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 COL10A1Q03692 680 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 ZNF658BQ4V348 819 aaPredicted RBP7.19□□□□□ -1.26
VPS36-201ENST00000378060 ASPHD2Q6ICH7 369 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 VWA1Q6PCB0 445 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 SLC25A45Q8N413 288 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 Q8WTZ3 238 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 TMEM54Q969K7 222 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 C19orf24Q9BVV8 132 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 SH3BGRL3Q9H299 93 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 HS3ST3B1Q9Y662 390 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 ESPL1Q14674 2120 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 FANCMQ8IYD8 2048 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 TGIF2-C20orf24A0A0A6YYL0 155 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 PATE3B3GLJ2 98 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 CTSBP07858 339 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 UCP1P25874 307 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 FAM214BQ7L5A3 538 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 DOLPP1Q86YN1 238 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 WNT5BQ9H1J7 359 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 WASHC3Q9Y3C0 194 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 INSIG2Q9Y5U4 225 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 ADRA2AP08913 450 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 TRIP6Q15654 476 aaKnown RBP7.19□□□□□ -1.26
VPS36-201ENST00000378060 BPIFA4PQ86YQ2 179 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 DNASE2BQ8WZ79 361 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 RPRMQ9NS64 109 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 A0A087WWC5 75 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 K7ERU9 68 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 K7N7A8 449 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 HYPMO75409 117 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 OR4A8P0C604 315 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 COX7A1P24310 79 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 MC5RP33032 325 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 FHITP49789 147 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 FOXL2P58012 376 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 HSPE1P61604 102 aaKnown RBP7.19□□□□□ -1.26
VPS36-201ENST00000378060 RPL31P62899 125 aaKnown RBP7.19□□□□□ -1.26
VPS36-201ENST00000378060 PMS2CLQ68D20 193 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 ZNF738Q8NE65 137 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 SPSB4Q96A44 273 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 SLC25A33Q9BSK2 321 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 GGACTQ9BVM4 153 aa7.19□□□□□ -1.26
VPS36-201ENST00000378060 TRBV9A0A0B4J1U6 114 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 LYPD3O95274 346 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 CD3EP07766 207 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 PTGDSP41222 190 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 LCN2P80188 198 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 TMEM30BQ3MIR4 351 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 IBA57Q5T440 356 aaKnown RBP7.18□□□□□ -1.26
VPS36-201ENST00000378060 ZNF818PQ6ZRF7 136 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 TMEM116Q8NCL8 245 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 TMEM45BQ96B21 275 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 SPSB2Q99619 263 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 RAB1BQ9H0U4 201 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 PARLQ9H300 379 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 HEXA-AS1Q9H8Q6 139 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 A0A1W2PR77 199 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 IGLV3-19P01714 112 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 SCGB1C2P0DMR2 95 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 ATRAIDQ6UW56 229 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 OR8I2Q8N0Y5 310 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 TP53RKQ96S44 253 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 DIRC2Q96SL1 478 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 RTBDNQ9BSG5 229 aaPredicted RBP7.18□□□□□ -1.26
VPS36-201ENST00000378060 QTRT1Q9BXR0 403 aaKnown RBP7.18□□□□□ -1.26
VPS36-201ENST00000378060 LINC00470Q9BZP3 86 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 LRP4O75096 1905 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 PLXND1Q9Y4D7 1925 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 ARHGEF17Q96PE2 2063 aaPredicted RBP7.18□□□□□ -1.26
VPS36-201ENST00000378060 F8VVB4 439 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 F8VWA3 439 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 PPIHO43447 177 aaKnown RBP7.18□□□□□ -1.26
VPS36-201ENST00000378060 AGFG2O95081 481 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 SP9P0CG40 484 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 GAMTQ14353 236 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 LY6G6FQ5SQ64 297 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 REC114Q7Z4M0 266 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 ASCL3Q9NQ33 180 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 RALGAPA1Q6GYQ0 2036 aa7.18□□□□□ -1.26
VPS36-201ENST00000378060 ODAMA1E959 279 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms