RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 PSCAO43653 123 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 SNAI3Q3KNW1 292 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 ACSF3Q4G176 576 aaPredicted RBP9.22□□□□□ -0.93
RTN3-206ENST00000377819 IGHV3OR15-7A0A075B7D8 119 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 NPIPB11E5RHQ5 1161 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 NDUFS8O00217 210 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 CYB5R3P00387 301 aaPredicted RBP9.22□□□□□ -0.93
RTN3-206ENST00000377819 MGAT2Q10469 447 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 LYZL2Q7Z4W2 148 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 C19orf24Q9BVV8 132 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 YAE1D1Q9NRH1 226 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 PLCE1Q9P212 2302 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.22□□□□□ -0.93
RTN3-206ENST00000377819 FOXI3A8MTJ6 420 aaPredicted RBP9.22□□□□□ -0.93
RTN3-206ENST00000377819 TRGC2P03986 189 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 MAGEA5P43359 124 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 CBLN2Q8IUK8 224 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 CT55Q8WUE5 264 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 LOC390937A0A1W2PQ73 354 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 ADRA2AP08913 450 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 PSG2P11465 335 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 SRIP30626 198 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 TMEM42Q69YG0 159 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
RTN3-206ENST00000377819 SLC25A37Q9NYZ2 338 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 ZNF107Q9UII5 783 aaPredicted RBP9.22□□□□□ -0.93
RTN3-206ENST00000377819 ASPDHA6ND91 283 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 C2CD4DB7Z1M9 353 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 OGG1O15527 345 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 TRGV3P03979 118 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 HMGA1P17096 107 aaKnown RBP9.21□□□□□ -0.93
RTN3-206ENST00000377819 BIVMQ86UB2 503 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 ABHD1Q96SE0 405 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 PPIAL4CA0A0B4J2A2 164 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 AMY1AP04745 511 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 PPIAL4GP0DN37 164 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 HSPE1P61604 102 aaKnown RBP9.21□□□□□ -0.93
RTN3-206ENST00000377819 RASL10BQ96S79 203 aa9.21□□□□□ -0.93
RTN3-206ENST00000377819 RPL36A-HNRNPH2H7BZ11 118 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 SOCS1O15524 211 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 PRSS53Q2L4Q9 553 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 OR51M1Q9H341 326 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 VWC2LB2RUY7 222 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 TMEM50BP56557 158 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 SPRED3Q2MJR0 410 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 ASCL4Q6XD76 172 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
RTN3-206ENST00000377819 LAMTOR3Q9UHA4 124 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
RTN3-206ENST00000377819 TRGV4A0A0C4DH28 118 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 IGHV3-35A0A0C4DH35 117 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 SMAD7O15105 426 aaKnown RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 LINC00614P0C842 121 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 Q6ZS52 159 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 OR9G1Q8NH87 305 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 SPSB4Q96A44 273 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 KCNK17Q96T54 332 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 NPCDR1Q9BY65 106 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 CYSLTR1Q9Y271 337 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 GPX4P36969 197 aaPredicted RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 ATP5IP56385 69 aaPredicted RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 RPS11P62280 158 aaKnown RBP eCLIP9.2□□□□□ -0.94
RTN3-206ENST00000377819 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 GATAD1Q8WUU5 269 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 RNF115Q9Y4L5 304 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 SYNGR3O43761 229 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 BGLAPP02818 100 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 SPINK2P20155 84 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 COL10A1Q03692 680 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 C18orf15Q96N68 181 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 WFIKKN1Q96NZ8 548 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 CHCHD5Q9BSY4 110 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 IGHV5-51A0A0C4DH38 117 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 VAX1Q5SQQ9 334 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 ZNF385CQ66K41 422 aaPredicted RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 NIT1Q86X76 327 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 C8orf46Q8TAG6 207 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 SFXN3Q9BWM7 321 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 MRPL20Q9BYC9 149 aaKnown RBP9.2□□□□□ -0.94
RTN3-206ENST00000377819 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 PEMTQ9UBM1 199 aa9.2□□□□□ -0.94
RTN3-206ENST00000377819 LOC105371242A0A075B767 164 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 INS-IGF2F8WCM5 200 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 PTP4A3O75365 173 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 TOMM40O96008 361 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 CA1P00915 261 aaPredicted RBP9.19□□□□□ -0.94
RTN3-206ENST00000377819 INSP01308 110 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 MYOD1P15172 320 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 HIKESHIQ53FT3 197 aa9.19□□□□□ -0.94
RTN3-206ENST00000377819 C12orf73Q69YU5 71 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms