RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 KIAA1644Q3SXP7 199 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 KRTCAP3Q53RY4 240 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 C11orf42Q8N5U0 333 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 CLEC5AQ9NY25 188 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 COA4Q9NYJ1 87 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SCO2A0A1W2PP80 73 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 MARCH11A6NNE9 402 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 UBE2CO00762 179 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 HPRT1P00492 218 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PRB4P10163 310 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 QRFPP83859 136 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 NHLH1Q02575 133 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SSX8Q7RTT4 187 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 RAB24Q969Q5 203 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PNRC2Q9NPJ4 139 aaKnown RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM131Q92545 1883 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 ASXL3Q9C0F0 2248 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 PINLYPA6NC86 204 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 COLCA2A8K830 154 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 CD55P08174 381 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 GNB2P62879 340 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 GABRA6Q16445 453 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 PTPRZ1P23471 2315 aaPredicted RBP5.56□□□□□ -1.52
SMC1A-202ENST00000375340 IGHV3-72A0A0B4J1Y9 119 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 TRGV8A0A0C4DH27 118 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF785A8K8V0 405 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 FAM157AC9JC47 383 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 SLC17A3O00476 420 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 UMODP07911 640 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 VOPP1Q96AW1 172 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 HARBI1Q96MB7 349 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 DCTN5Q9BTE1 182 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 SMDT1Q9H4I9 107 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 C17orf98A8MV24 154 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 J3KRW8 73 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 P01737 135 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 KCNMB1Q16558 191 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 ABHD12Q8N2K0 398 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 TCTEX1D1Q8N7M0 179 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 OR4F17Q8NGA8 305 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 RPRMQ9NS64 109 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 TMSB15BA0A087X1C1 80 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 J3QR06 171 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 CCL1P22362 96 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 MPZP25189 248 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 MPV17P39210 176 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 ATP5G3P48201 142 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 UCP3P55916 312 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 PHF3Q92576 2039 aaKnown RBP5.56□□□□□ -1.52
SMC1A-202ENST00000375340 NUP210LQ5VU65 1888 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 NPIPB13A6NJU9 1138 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 NPIPB4C9JG80 1138 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 GCGP01275 180 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 OR5AL1P0C617 328 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 STPG3Q8N7X2 389 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF71Q9NQZ8 489 aaPredicted RBP5.56□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF318Q5VUA4 2279 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 AGAP20933 346 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 SAXO1Q8IYX7 474 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 LSM10Q969L4 123 aaKnown RBP5.56□□□□□ -1.52
SMC1A-202ENST00000375340 PAXXQ9BUH6 204 aa5.56□□□□□ -1.52
SMC1A-202ENST00000375340 KMT2EQ8IZD2 1858 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 ABLIM2Q6H8Q1 611 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PLPPR1Q8TBJ4 325 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 KLF14Q8TD94 323 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 RPEQ96AT9 228 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 GSX1Q9H4S2 264 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PRDM6Q9NQX0 595 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 SLC25A10Q9UBX3 287 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 REC114Q7Z4M0 266 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 TIMD4Q96H15 378 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 P2RX4Q99571 388 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 CHRDL1Q9BU40 450 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 AAMDCQ9H7C9 122 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 RNF7Q9UBF6 113 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 KLK10O43240 276 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 HGFACQ04756 655 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PRNDQ9UKY0 176 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 WASHC3Q9Y3C0 194 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 RAB29O14966 203 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 SMPD2O60906 423 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 TNFRSF1AP19438 455 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 TRAV17A0A0B4J275 112 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 DNPH1O43598 174 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 KBTBD11O94819 623 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 CD5P06127 495 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PPP1R32Q7Z5V6 425 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 OR4D5Q8NGN0 318 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 OR2T6Q8NHC8 308 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A10PA6NDY2 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A18PA6NE21 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A16PA6NEW6 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A20PA6NIJ5 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A8PA6NJQ4 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A7PA6NKC0 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A22PA8MWA6 464 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms