RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 TMEM54Q969K7 222 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 PATE3B3GLJ2 98 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 FGF5P12034 268 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 TMEM187Q14656 261 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
LMX1B-202ENST00000373474 GPR146Q96CH1 333 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 JKAMPQ9P055 326 aa12.22□□□□□ -0.45
LMX1B-202ENST00000373474 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 LRRC37A2A6NM11 1700 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 DERL1Q9BUN8 251 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 C11orf68Q9H3H3 251 aaKnown RBP12.21□□□□□ -0.45
LMX1B-202ENST00000373474 AUP1Q9Y679 476 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 C1QL1O75973 258 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 PMS2CLQ68D20 193 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 TTC9CQ8N5M4 171 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 PKIBQ9C010 78 aa12.21□□□□□ -0.45
LMX1B-202ENST00000373474 MRPL16Q9NX20 251 aaKnown RBP12.21□□□□□ -0.45
LMX1B-202ENST00000373474 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.46
LMX1B-202ENST00000373474 A0A0G2JK05 382 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 PRSS2P07478 247 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 DANCRP0C864 163 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 RPS11P62280 158 aaKnown RBP eCLIP12.21□□□□□ -0.46
LMX1B-202ENST00000373474 PAPPA-AS1Q5QFB9 102 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 TMEM78Q5T7P6 136 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 IL36RNQ9UBH0 155 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.46
LMX1B-202ENST00000373474 SCN3AQ9NY46 2000 aa12.21□□□□□ -0.46
LMX1B-202ENST00000373474 NPIPB13A6NJU9 1138 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 NPIPB4C9JG80 1138 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 FAM90A26D6RGX4 464 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 CLDN14O95500 239 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 RND3P61587 244 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 TAF15Q92804 592 aaKnown RBP eCLIP12.2□□□□□ -0.46
LMX1B-202ENST00000373474 LOC105371267A0A1B0GV96 52 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 UBE2L6O14933 153 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 VENTXO95231 258 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 C2orf83Q53S99 150 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 TCF23Q7RTU1 214 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 SLC25A10Q9UBX3 287 aaPredicted RBP12.2□□□□□ -0.46
LMX1B-202ENST00000373474 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 SH3BGRL3Q9H299 93 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 SPCS1Q9Y6A9 102 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 LOC285556D6RIA3 1793 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 A0A1W2PPE3 182 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 C7orf71A4D174 169 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 LCN2P80188 198 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 WNT2BQ93097 391 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 INSIG2Q9Y5U4 225 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 ZNF646O15015 1829 aaPredicted RBP12.2□□□□□ -0.46
LMX1B-202ENST00000373474 J3KRW8 73 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 MGST3O14880 152 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 LINC00869P0C866 280 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
LMX1B-202ENST00000373474 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 UCP3P55916 312 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 ZNF362Q5T0B9 420 aaPredicted RBP12.19□□□□□ -0.46
LMX1B-202ENST00000373474 OR11H1Q8NG94 326 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 APOBEC4Q8WW27 367 aaKnown RBP12.19□□□□□ -0.46
LMX1B-202ENST00000373474 ZCCHC14Q8WYQ9 949 aaKnown RBP12.19□□□□□ -0.46
LMX1B-202ENST00000373474 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 MARS2Q96GW9 593 aaKnown RBP12.19□□□□□ -0.46
LMX1B-202ENST00000373474 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 PCM1Q15154 2024 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 FAM157AC9JC47 383 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 K7N7A8 449 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 OTX1P32242 354 aaPredicted RBP12.19□□□□□ -0.46
LMX1B-202ENST00000373474 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 LOC101059948A0A1B0GTJ6 334 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 HIST1H1AQ02539 215 aaPredicted RBP12.19□□□□□ -0.46
LMX1B-202ENST00000373474 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 C19orf24Q9BVV8 132 aa12.19□□□□□ -0.46
LMX1B-202ENST00000373474 SLC25A45Q8N413 288 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 SOSTQ9BQB4 213 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 RECKO95980 971 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 ZNF441Q8N8Z8 693 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 MRAP2Q96G30 205 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 DLL3Q9NYJ7 618 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
LMX1B-202ENST00000373474 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
LMX1B-202ENST00000373474 MMD2Q8IY49 270 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 OR10J6PQ8NGY7 276 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 IGKV3-11P04433 115 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 TMEM177Q53S58 311 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 C10orf128Q5T292 105 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 OR4D5Q8NGN0 318 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 CEACAM18A8MTB9 384 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 COX6A1P12074 109 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 ID4P47928 161 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 C1orf185Q5T7R7 199 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 FGFRL1Q8N441 504 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
LMX1B-202ENST00000373474 F2RL2O00254 374 aa12.17□□□□□ -0.46
LMX1B-202ENST00000373474 RNASE1P07998 156 aaKnown RBP12.17□□□□□ -0.46
LMX1B-202ENST00000373474 COX5BP10606 129 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms