RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SGK494Q96LW2 274 aa9.9□□□□□ -0.83
VCL-202ENST00000372755 ITGB4P16144 1822 aa9.9□□□□□ -0.83
VCL-202ENST00000372755 LY6EQ16553 131 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 SLC22A18ASQ8N1D0 253 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 KLF14Q8TD94 323 aaPredicted RBP9.89□□□□□ -0.83
VCL-202ENST00000372755 ELOVL5Q9NYP7 299 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 TRBV5-7A0A0A0MS05 114 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 FOXH1O75593 365 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 PF4P02776 101 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 ERGP11308 486 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 AGAP20933 346 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 SAPCD1Q5SSQ6 148 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 CENPVQ7Z7K6 275 aaPredicted RBP9.89□□□□□ -0.83
VCL-202ENST00000372755 IGHV1-69-2A0A0G2JMI3 117 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 A0A1W2PP11 408 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 J3QW42 95 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 HAX1O00165 279 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 SYNGR3O43761 229 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 DNAL4O96015 105 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 FAM206AQ9NX38 181 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 TTC3P53804 2025 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 ZG16O60844 167 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 KLK2P20151 261 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 NEU1Q99519 415 aa9.89□□□□□ -0.83
VCL-202ENST00000372755 ARF6P62330 175 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 FXYD3Q14802 87 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 OR4D5Q8NGN0 318 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 CCL19Q99731 98 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 PARLQ9H300 379 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 TCF19Q9Y242 345 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 C7orf71A4D174 169 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 SRIP30626 198 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 EMP1P54849 157 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 ZNF385CQ66K41 422 aaPredicted RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 LHFPL6Q9Y693 200 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 B9A039 149 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 H7C1H1 209 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 CRYBB3P26998 211 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 SNAI3Q3KNW1 292 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 FAM74A4Q5TZK3 123 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 WNT5BQ9H1J7 359 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 AKAP11Q9UKA4 1901 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 MBNL2Q5VZF2 373 aaKnown RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 IGKV1-8A0A0C4DH67 115 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 NMBP08949 121 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 NUTF2P61970 127 aaKnown RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 ZNF660Q6AZW8 331 aaPredicted RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 MYO5AQ9Y4I1 1855 aaKnown RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 TNRC6CQ9HCJ0 1690 aaKnown RBP9.88□□□□□ -0.83
VCL-202ENST00000372755 Q96M66 194 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 AMELYQ99218 206 aa9.88□□□□□ -0.83
VCL-202ENST00000372755 TGIF2-C20orf24A0A0A6YYL0 155 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 A0A1W2PQM1 296 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 WISP3O95389 354 aaPredicted RBP9.87□□□□□ -0.83
VCL-202ENST00000372755 NAT1P18440 290 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 CA7P43166 264 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 UCP3P55916 312 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 SMUG1Q53HV7 270 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 PNKDQ8N490 385 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
VCL-202ENST00000372755 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 NABP2Q9BQ15 211 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 IGKV3OR2-268A0A0C4DH90 116 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 C1QL1O75973 258 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 FOXL2P58012 376 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 C10orf128Q5T292 105 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 FHL5Q5TD97 284 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 IGHMP01871 453 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 IL4P05112 153 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 REG1AP05451 166 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 COX6A1P12074 109 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 CDX1P47902 265 aaPredicted RBP9.87□□□□□ -0.83
VCL-202ENST00000372755 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
VCL-202ENST00000372755 PARD6GQ9BYG4 376 aaPredicted RBP9.87□□□□□ -0.83
VCL-202ENST00000372755 TRBV20OR9-2A0A075B6H5 130 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 LNP1A1A4G5 178 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 NPBWR2P48146 333 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 PRELID3AQ96N28 172 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 KLK15Q9H2R5 256 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 ECM29Q5VYK3 1845 aa9.87□□□□□ -0.83
VCL-202ENST00000372755 PUSL1Q8N0Z8 303 aaKnown RBP9.86□□□□□ -0.83
VCL-202ENST00000372755 GATAD1Q8WUU5 269 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 HS3ST3B1Q9Y662 390 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 CEACAM4O75871 244 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 SAP25Q8TEE9 199 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 H0YL77 283 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 RND3P61587 244 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 HBBP68871 147 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 KLRB1Q12918 225 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 TMEM54Q969K7 222 aa9.86□□□□□ -0.83
VCL-202ENST00000372755 NPDC1Q9NQX5 325 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms