RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 LFNGQ8NES3 379 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 ZDHHC16Q969W1 377 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 MS4A5Q9H3V2 200 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 LINC00574Q9H8X3 128 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 TMEM106BQ9NUM4 274 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 NDRG3Q9UGV2 375 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 GAB2Q9UQC2 676 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 ARFGEF3Q5TH69 2177 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 SAA2-SAA4A0A096LPE2 208 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 FAM157AC9JC47 383 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 GPR37O15354 613 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 RBFOX2O43251 390 aaKnown RBP eCLIP14.75□□□□□ -0.05
CTSA-204ENST00000372484 SAA2P0DJI9 122 aaPredicted RBP14.75□□□□□ -0.05
CTSA-204ENST00000372484 ZNF273Q14593 569 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 C1orf229Q6ZS94 237 aaPredicted RBP14.75□□□□□ -0.05
CTSA-204ENST00000372484 SSX9Q7RTT3 188 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 KDF1Q8NAX2 398 aaPredicted RBP14.75□□□□□ -0.05
CTSA-204ENST00000372484 LINC01560Q8TB33 94 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 RSG1Q9BU20 258 aa14.75□□□□□ -0.05
CTSA-204ENST00000372484 CEBPZOSA8MTT3 80 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 SNAPINO95295 136 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 H2AFB1P0C5Y9 115 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 OR9G9P0C7N8 305 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 APOBEC3AP31941 199 aaPredicted RBP14.74□□□□□ -0.05
CTSA-204ENST00000372484 GNG10P50151 68 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 PPT1P50897 306 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 SLC38A11Q08AI6 406 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 LYG1Q8N1E2 194 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.74□□□□□ -0.05
CTSA-204ENST00000372484 CIB3Q96Q77 187 aaPredicted RBP14.74□□□□□ -0.05
CTSA-204ENST00000372484 PBDC1Q9BVG4 233 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 SCRT1Q9BWW7 348 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 LINC00312Q9Y6C7 94 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 DNASE2O00115 360 aaPredicted RBP14.74□□□□□ -0.05
CTSA-204ENST00000372484 MMP23AO75900 390 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 KIR2DS2P43631 304 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 ERVK-16P61578 105 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 SPINK9Q5DT21 86 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 PRAMEF5Q5TYX0 476 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 OR4C12Q96R67 309 aa14.74□□□□□ -0.05
CTSA-204ENST00000372484 QTRT1Q9BXR0 403 aaKnown RBP14.74□□□□□ -0.05
CTSA-204ENST00000372484 ANKHD1Q8IWZ3 2542 aaKnown RBP14.73□□□□□ -0.05
CTSA-204ENST00000372484 FAM74A7A6NL05 159 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 OR2B8PP59922 312 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 RPL31P62899 125 aaKnown RBP14.73□□□□□ -0.05
CTSA-204ENST00000372484 MRPS11P82912 194 aaKnown RBP14.73□□□□□ -0.05
CTSA-204ENST00000372484 LRRC75BQ2VPJ9 315 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 TMEM30BQ3MIR4 351 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 FBXL19-AS1Q494R0 122 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 FAM74A3Q4VXF1 159 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 VKORC1L1Q8N0U8 176 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 ZNF439Q8NDP4 499 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 DDB2Q92466 427 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 RPUSD1Q9UJJ7 312 aaKnown RBP14.73□□□□□ -0.05
CTSA-204ENST00000372484 RELNP78509 3460 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 NCOR2Q9Y618 2525 aa14.73□□□□□ -0.05
CTSA-204ENST00000372484 FAM90A9PA6NNJ1 464 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 NQO2P16083 231 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 GRNP28799 593 aaKnown RBP14.72□□□□□ -0.05
CTSA-204ENST00000372484 TLE4Q04727 773 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 DPPA3Q6W0C5 159 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 OR4S2Q8NH73 311 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 UBE2L5PA0A1B0GUS4 154 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 PPIHO43447 177 aaKnown RBP14.72□□□□□ -0.05
CTSA-204ENST00000372484 PLAUP00749 431 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 IFNA17P01571 189 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 MEF2CQ06413 473 aaPredicted RBP14.72□□□□□ -0.05
CTSA-204ENST00000372484 SPSB3Q6PJ21 355 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 OR4A16Q8NH70 328 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 SFT2D1Q8WV19 159 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 ZNF251Q9BRH9 671 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 WDR61Q9GZS3 305 aaKnown RBP14.72□□□□□ -0.05
CTSA-204ENST00000372484 GAL3ST2Q9H3Q3 398 aa14.72□□□□□ -0.05
CTSA-204ENST00000372484 B9A039 149 aa14.71□□□□□ -0.05
CTSA-204ENST00000372484 CCL20P78556 96 aa14.71□□□□□ -0.05
CTSA-204ENST00000372484 TAGLNQ01995 201 aaKnown RBP14.71□□□□□ -0.05
CTSA-204ENST00000372484 EFNB3Q15768 340 aa14.71□□□□□ -0.05
CTSA-204ENST00000372484 PSMG3Q9BT73 122 aaPredicted RBP14.71□□□□□ -0.05
CTSA-204ENST00000372484 CISD1Q9NZ45 108 aaKnown RBP14.71□□□□□ -0.05
CTSA-204ENST00000372484 BTBD17A6NE02 478 aa14.71□□□□□ -0.06
CTSA-204ENST00000372484 OR8U8P0C7N1 319 aa14.71□□□□□ -0.06
CTSA-204ENST00000372484 NPBWR1P48145 328 aa14.71□□□□□ -0.06
CTSA-204ENST00000372484 THBS3P49746 956 aa14.71□□□□□ -0.06
CTSA-204ENST00000372484 OR10P1Q8NGE3 313 aa14.71□□□□□ -0.06
CTSA-204ENST00000372484 PARD6GQ9BYG4 376 aaPredicted RBP14.71□□□□□ -0.06
CTSA-204ENST00000372484 KPTNQ9Y664 436 aa14.71□□□□□ -0.06
CTSA-204ENST00000372484 FCN3O75636 299 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 ERVFRD-1P60508 538 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 AARDQ4LEZ3 155 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 TMEM88Q6PEY1 159 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 LYPD2Q6UXB3 125 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 SLC25A48Q6ZT89 311 aaKnown RBP14.7□□□□□ -0.06
CTSA-204ENST00000372484 H1FXQ92522 213 aaKnown RBP14.7□□□□□ -0.06
CTSA-204ENST00000372484 TAF15Q92804 592 aaKnown RBP eCLIP14.7□□□□□ -0.06
CTSA-204ENST00000372484 PINX1Q96BK5 328 aaKnown RBP14.7□□□□□ -0.06
CTSA-204ENST00000372484 ADTRPQ96IZ2 230 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 TMEM140Q9NV12 185 aa14.7□□□□□ -0.06
CTSA-204ENST00000372484 NDUFB3O43676 98 aa14.69□□□□□ -0.06
CTSA-204ENST00000372484 C1QTNF9P0C862 333 aa14.69□□□□□ -0.06
CTSA-204ENST00000372484 SERF2P84101 59 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms