RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 IGKV1-33P01594 117 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 TAGLN2P37802 199 aaKnown RBP17.05■□□□□ 0.32
VEGFA-204ENST00000372064 FGF8P55075 233 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-204ENST00000372064 RPP25LQ8N5L8 163 aaKnown RBP17.05■□□□□ 0.32
VEGFA-204ENST00000372064 P2RX4Q99571 388 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 IFI27L2Q9H2X8 130 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 MAP1LC3B2A6NCE7 125 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 RBMXL2O75526 392 aaKnown RBP17.05■□□□□ 0.32
VEGFA-204ENST00000372064 MDKP21741 143 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-204ENST00000372064 RPL35P42766 123 aaKnown RBP17.05■□□□□ 0.32
VEGFA-204ENST00000372064 GNB2P62879 340 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 SPINK9Q5DT21 86 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 MRGPRGQ86SM5 289 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 CA5BP1Q8WTZ4 195 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 ABHD17AQ96GS6 310 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 MAP1LC3BQ9GZQ8 125 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 OR6C3Q9NZP0 311 aa17.05■□□□□ 0.32
VEGFA-204ENST00000372064 RBFOX2O43251 390 aaKnown RBP eCLIP17.04■□□□□ 0.325e-9■□□□□ 10.6
VEGFA-204ENST00000372064 OR9G9P0C7N8 305 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 CCKARP32238 428 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 ZNF134P52741 427 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 HNF4GQ14541 408 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 ACSM6Q6P461 480 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 QTRT1Q9BXR0 403 aaKnown RBP17.04■□□□□ 0.32
VEGFA-204ENST00000372064 CD40P25942 277 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 AKR1D1P51857 326 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 RPS16P62249 146 aaKnown RBP17.04■□□□□ 0.32
VEGFA-204ENST00000372064 HEPN1Q6WQI6 88 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 CALYQ9NYX4 217 aa17.04■□□□□ 0.32
VEGFA-204ENST00000372064 C5orf52A6NGY3 159 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 CEBPZOSA8MTT3 80 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 ITGB1BP1O14713 200 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 DUX4L9Q6RFH8 374 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-204ENST00000372064 VAX2Q9UIW0 290 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 GAB2Q9UQC2 676 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 DSCAMO60469 2012 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 FCGR3BO75015 233 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 UTF1Q5T230 341 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 Q8TCH9 128 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 FAM234AQ9H0X4 552 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 ZGRF1Q86YA3 2104 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 IGHV1-46P01743 117 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 SNRPEP62304 92 aaKnown RBP17.03■□□□□ 0.32
VEGFA-204ENST00000372064 RAB11AP62491 216 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 C17orf58Q2M2W7 97 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 RPL39P5Q59GN2 51 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 DOLPP1Q86YN1 238 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 C1QL4Q86Z23 238 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 GCM1Q9NP62 436 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 SIRT7Q9NRC8 400 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 IL19Q9UHD0 177 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 TP53TG5Q9Y2B4 290 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 BSNQ9UPA5 3926 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 ATMQ13315 3056 aa17.03■□□□□ 0.32
VEGFA-204ENST00000372064 C15orf62A8K5M9 175 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 M0R1X1 148 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 LY86O95711 162 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 FGF7P21781 194 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 SELENOVP59797 346 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 TNFAIP6P98066 277 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-204ENST00000372064 PDLIM3Q53GG5 364 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-204ENST00000372064 SDSLQ96GA7 329 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 RNF7Q9UBF6 113 aa17.02■□□□□ 0.32
VEGFA-204ENST00000372064 CXorf65A6NEN9 183 aa17.02■□□□□ 0.31
VEGFA-204ENST00000372064 ZNF727A8MUV8 499 aa17.02■□□□□ 0.31
VEGFA-204ENST00000372064 EIF3GO75821 320 aaKnown RBP eCLIP17.02■□□□□ 0.31
VEGFA-204ENST00000372064 MBP02144 154 aa17.02■□□□□ 0.31
VEGFA-204ENST00000372064 CISD2Q8N5K1 135 aaKnown RBP17.02■□□□□ 0.31
VEGFA-204ENST00000372064 SLC39A9Q9NUM3 307 aa17.02■□□□□ 0.31
VEGFA-204ENST00000372064 A0A0G2JNJ9 132 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 B4DEV8 164 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 CYB5R3P00387 301 aaPredicted RBP17.01■□□□□ 0.31
VEGFA-204ENST00000372064 IFNA1P01562 189 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 PLA2G5P39877 138 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 STUMQ69YW2 141 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 DEFB108BQ8NET1 73 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 NPCDR1Q9BY65 106 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 Q9UFV3 132 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 ATXN7O15265 892 aaPredicted RBP17.01■□□□□ 0.31
VEGFA-204ENST00000372064 SLC31A2O15432 143 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 TFF3Q07654 80 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 ADAM5Q6NVV9 412 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 OR52E5Q8NH55 327 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 DDB2Q92466 427 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 LEAP2Q969E1 77 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 LHX4Q969G2 390 aa17.01■□□□□ 0.31
VEGFA-204ENST00000372064 ZNF98A6NK75 572 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 UBE2CO00762 179 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 KIR2DS2P43631 304 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 TDGF1P3P51864 188 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 OR2B8PP59922 312 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 SSX9Q7RTT3 188 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 RAB9BQ9NP90 201 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 A0A1W2PPE3 182 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 RAB7AP51149 207 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 PNRC1Q12796 327 aaPredicted RBP17■□□□□ 0.31
VEGFA-204ENST00000372064 TGIF2LYQ8IUE0 185 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 NUP37Q8NFH4 326 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 SH3BGRL2Q9UJC5 107 aa17■□□□□ 0.31
VEGFA-204ENST00000372064 CTXND1A0A1B0GTU2 59 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms