RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IGLV1-47P01700 117 aa21.42■■□□□ 1.02
ATPAF1-202ENST00000371937 COL8A1P27658 744 aa21.42■■□□□ 1.02
ATPAF1-202ENST00000371937 POLR2GP62487 172 aaKnown RBP eCLIP21.42■■□□□ 1.02
ATPAF1-202ENST00000371937 DHRS7BQ6IAN0 325 aaPredicted RBP21.42■■□□□ 1.02
ATPAF1-202ENST00000371937 PERPQ96FX8 193 aa21.42■■□□□ 1.02
ATPAF1-202ENST00000371937 RRASP10301 218 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 MMP9P14780 707 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 P2RY1P47900 373 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 ARHGDIBP52566 201 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 DSCR9P59020 149 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 HLA-DRB5Q30154 266 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 DMBX1Q8NFW5 382 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 OR8H1Q8NGG4 311 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 PAIP2BQ9ULR5 123 aaKnown RBP21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 FAM90A9PA6NNJ1 464 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 FAM90A26D6RGX4 464 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 BCL2L11O43521 198 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 CRYZL1O95825 349 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 APOA2P02652 100 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 PRTN3P24158 256 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 RPL12P30050 165 aaKnown RBP21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 TEX261Q6UWH6 196 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 NRGNQ92686 78 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 MRPL20Q9BYC9 149 aaKnown RBP21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 MAGT1Q9H0U3 335 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 SLC35D1Q9NTN3 355 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 AMMECR1Q9Y4X0 333 aaPredicted RBP21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 U3KQ87 197 aa21.41■■□□□ 1.02
ATPAF1-202ENST00000371937 SPG11Q96JI7 2443 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 MSGN1A6NI15 193 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 VWC2LB2RUY7 222 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 FOXH1O75593 365 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 HKR1P10072 659 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 LCN2P80188 198 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 CRYBG3Q68DQ2 2970 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 SLC51BQ86UW2 128 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 TGIF2LXQ8IUE1 241 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 ZC4H2Q9NQZ6 224 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 KPTNQ9Y664 436 aa21.4■■□□□ 1.02
ATPAF1-202ENST00000371937 SSSCA1O60232 199 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 COX7A1P24310 79 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 VAMP2P63027 116 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 GPR157Q5UAW9 335 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 ZNF767PQ75MW2 155 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 OR5AN1Q8NGI8 311 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 ARPC5LQ9BPX5 153 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 PCGF1Q9BSM1 259 aa21.39■■□□□ 1.02
ATPAF1-202ENST00000371937 HRASP01112 189 aa21.39■■□□□ 1.01
ATPAF1-202ENST00000371937 MIDNQ504T8 468 aa21.39■■□□□ 1.01
ATPAF1-202ENST00000371937 PNKDQ8N490 385 aa21.39■■□□□ 1.01
ATPAF1-202ENST00000371937 AIFM2Q9BRQ8 373 aa21.39■■□□□ 1.01
ATPAF1-202ENST00000371937 C11orf1Q9H5F2 150 aa21.39■■□□□ 1.01
ATPAF1-202ENST00000371937 IGHV2-70DA0A0C4DH43 119 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 BUB1B-PAK6H3BSN5 160 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 CHST1O43916 411 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 NXPH3O95157 252 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 REG1BP48304 166 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 DLX1P56177 255 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 PAX2Q02962 417 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 OR11H6Q8NGC7 330 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 RAB40CQ96S21 281 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 NABP2Q9BQ15 211 aa21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 UNKLQ9H9P5 680 aaKnown RBP21.38■■□□□ 1.01
ATPAF1-202ENST00000371937 MARVELD3Q96A59 401 aa21.37■■□□□ 1.01
ATPAF1-202ENST00000371937 SIRT7Q9NRC8 400 aa21.37■■□□□ 1.01
ATPAF1-202ENST00000371937 H0YJW9 148 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 SYNGR2O43760 224 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 IFNA7P01567 189 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 ZNF680Q8NEM1 530 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 RHOVQ96L33 236 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 H7C2Y5 167 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 GPR137BO60478 399 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 RBMXL2O75526 392 aaKnown RBP21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 POU2AF1Q16633 256 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 SSX9Q7RTT3 188 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 OR2C3Q8N628 320 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 OR4P4Q8NGL7 312 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 HSPB7Q9UBY9 170 aa21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 POLR3KQ9Y2Y1 108 aaPredicted RBP21.36■■□□□ 1.01
ATPAF1-202ENST00000371937 TAAR5O14804 337 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 TXNL1O43396 289 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 MED6O75586 246 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 MC5RP33032 325 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 PRB3Q04118 309 aaPredicted RBP21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 TNFRSF9Q07011 255 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 DIAPH2-AS1Q14236 149 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 PDPNQ86YL7 162 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 OSR1Q8TAX0 266 aaPredicted RBP21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 LYRM2Q9NU23 88 aaPredicted RBP21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 TMEM140Q9NV12 185 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 CACFD1Q9UGQ2 172 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 TENM4Q6N022 2769 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 ARHGAP32A7KAX9 2087 aa21.35■■□□□ 1.01
ATPAF1-202ENST00000371937 GAPDHP04406 335 aaKnown RBP21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 IGKV1-16P04430 117 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 RAB13P51153 203 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 VKORC1L1Q8N0U8 176 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 OR4A16Q8NH70 328 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 LHX4Q969G2 390 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms