RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZNF205O95201 554 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 GABRG2P18507 467 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 RTN4RQ9BZR6 473 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 TCFL5Q9UL49 500 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 PCNX1Q96RV3 2341 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-201ENST00000371817 VSIG8P0DPA2 414 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 CCL2P13500 99 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 WFDC5Q8TCV5 224 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 SRD5A2P31213 254 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 CX3CL1P78423 397 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 DYNLRB2Q8TF09 96 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 TMEM56-RWDD3S4R434 201 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 DOCK4Q8N1I0 1966 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 RBMY1BA6NDE4 496 aaKnown RBP13.26□□□□□ -0.29
COL5A1-201ENST00000371817 RBMY1EA6NEQ0 496 aaKnown RBP13.26□□□□□ -0.29
COL5A1-201ENST00000371817 RBMY1DP0C7P1 496 aaKnown RBP13.26□□□□□ -0.29
COL5A1-201ENST00000371817 RBMY1A1P0DJD3 496 aaKnown RBP13.26□□□□□ -0.29
COL5A1-201ENST00000371817 RBMY1CP0DJD4 496 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 PSG9Q00887 426 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 ZNF585BQ52M93 769 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 A6NNC1 897 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 CA7P43166 264 aa13.26□□□□□ -0.29
COL5A1-201ENST00000371817 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 PATE1Q8WXA2 126 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 THAP10Q9P2Z0 257 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-201ENST00000371817 NDUFA3O95167 84 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-201ENST00000371817 MRPL52Q86TS9 123 aaKnown RBP13.25□□□□□ -0.29
COL5A1-201ENST00000371817 VKORC1L1Q8N0U8 176 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 ZNF645Q8N7E2 425 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 CD27P26842 260 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 TFPI2P48307 235 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 ISXQ2M1V0 245 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 OR52M1Q8NGK5 317 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 FAM90A26D6RGX4 464 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 DDX60LQ5H9U9 1706 aaKnown RBP13.25□□□□□ -0.29
COL5A1-201ENST00000371817 PIMREGQ9BSJ6 248 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 MED12LQ86YW9 2145 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 EBLN2Q6P2I7 272 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 DLK2Q6UY11 383 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 TMEM106BQ9NUM4 274 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 KCNMB2Q9Y691 235 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 TRAV9-2A0A087WT02 112 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 KBTBD11-OT1A0A1B0GTJ5 212 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 NRN1Q9NPD7 142 aa13.25□□□□□ -0.29
COL5A1-201ENST00000371817 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 SLC25A20O43772 301 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 MARCH11A6NNE9 402 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 KIAA0040Q15053 153 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 MIC13Q5XKP0 118 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 ST6GALNAC2Q9UJ37 374 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 MRPS18BQ9Y676 258 aaKnown RBP13.24□□□□□ -0.29
COL5A1-201ENST00000371817 H0Y8X5 98 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 CD8AP01732 235 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 SFTPCP11686 197 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 OR2H1Q9GZK4 316 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 TMEM155Q4W5P6 130 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 F2RL2O00254 374 aa13.24□□□□□ -0.29
COL5A1-201ENST00000371817 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 MFAP4P55083 255 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-201ENST00000371817 SLC25A2Q9BXI2 301 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 COL6A6A6NMZ7 2263 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 TRGV5A0A0B4J1U4 118 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 H3BRM9 83 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 C8orf88P0DMB2 117 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 P2RY6Q15077 328 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 GNRHR2Q96P88 292 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 CGB1A6NKQ9 187 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 ZNF56Q15929 161 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 C2orf68Q2NKX9 166 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 SFTA2Q6UW10 78 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 POC1AQ8NBT0 407 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 KLF4O43474 513 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 MC5RP33032 325 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 ZNF793Q6ZN11 406 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 OR51G1Q8NGK1 321 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 IGHV3-21A0A0B4J1V1 117 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 GPX4P36969 197 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-201ENST00000371817 KCNMB1Q16558 191 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 NXPH1P58417 271 aa13.23□□□□□ -0.29
COL5A1-201ENST00000371817 TRAV5A0A0B4J249 113 aa13.22□□□□□ -0.29
COL5A1-201ENST00000371817 A0A1B0GUT8 65 aa13.22□□□□□ -0.29
COL5A1-201ENST00000371817 MRPS18AQ9NVS2 196 aaKnown RBP13.22□□□□□ -0.29
COL5A1-201ENST00000371817 FREM1Q5H8C1 2179 aa13.22□□□□□ -0.29
COL5A1-201ENST00000371817 HIST1H2BKO60814 126 aa13.22□□□□□ -0.29
COL5A1-201ENST00000371817 HIST1H2BJP06899 126 aa13.22□□□□□ -0.29
COL5A1-201ENST00000371817 HIST1H2BOP23527 126 aa13.22□□□□□ -0.29
COL5A1-201ENST00000371817 HIST1H2BBP33778 126 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms