RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PRDX2P32119 198 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 SUMO2P61956 95 aaKnown RBP10.81□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM177Q53S58 311 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 OR2A4O95047 310 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 ZNF79Q15937 498 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 GALNT14Q96FL9 552 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 OR2A7Q96R45 310 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 METTL1Q9UBP6 276 aaKnown RBP10.81□□□□□ -0.68
HCFC1-202ENST00000369984 SSTR5P35346 364 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 LAMTOR1Q6IAA8 161 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 VN1R4Q7Z5H5 301 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 SBF1O95248 1867 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 CA11O75493 328 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 OVCH2Q7RTZ1 564 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 APOBEC4Q8WW27 367 aaKnown RBP10.8□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM56-RWDD3S4R434 201 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 INO80CQ6PI98 192 aaPredicted RBP10.8□□□□□ -0.68
HCFC1-202ENST00000369984 HMGCLL1Q8TB92 370 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 SCNM1Q9BWG6 230 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 SPCS1Q9Y6A9 102 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 SIGLEC5O15389 551 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 LINC00869P0C866 280 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 SIGLEC14Q08ET2 396 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 ZIC1Q15915 447 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 C1QTNF12Q5T7M4 302 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 FAM106CPP0CH98 169 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 TRAV12-3A0A0B4J271 114 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 CISD3P0C7P0 127 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 MS4A5Q9H3V2 200 aa10.8□□□□□ -0.68
HCFC1-202ENST00000369984 LHX8Q68G74 356 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 CCL3P10147 92 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 KIR2DL4Q99706 377 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 PMCHL2Q9BQD1 86 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 ST6GALNAC2Q9UJ37 374 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 EIF3GO75821 320 aaKnown RBP eCLIP10.79□□□□□ -0.68
HCFC1-202ENST00000369984 HLA-DRB1P01911 266 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 LIFP15018 202 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 PARLQ9H300 379 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 DSPPQ9NZW4 1301 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM262E9PQX1 116 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 TNFSF14O43557 240 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 CACNA1EQ15878 2313 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 HSPB1P04792 205 aaKnown RBP10.79□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM45BQ96B21 275 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM160Q9NX00 188 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 FBXW9Q5XUX1 488 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 MEGF9Q9H1U4 602 aa10.79□□□□□ -0.68
HCFC1-202ENST00000369984 A0A0U1RQV5 110 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 FXYD3Q14802 87 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 OR10S1Q8NGN2 331 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 IGHV5-10-1A0A0J9YXX1 117 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
HCFC1-202ENST00000369984 HCP5Q6MZN7 132 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
HCFC1-202ENST00000369984 LCTP09848 1927 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 PKDREJQ9NTG1 2253 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 C21orf140B9A014 251 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 ANOS1P23352 680 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 DCAF12L2Q5VW00 463 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 NPFFO15130 113 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 VSIG10L2P0DP72 767 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 AGAP20933 346 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 DRD3P35462 400 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 PSG9Q00887 426 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 SRSF4Q08170 494 aaKnown RBP10.78□□□□□ -0.68
HCFC1-202ENST00000369984 VAX1Q5SQQ9 334 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
HCFC1-202ENST00000369984 WIPI2Q9Y4P8 454 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 CX3CL1P78423 397 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 UNQ9370/PRO34162Q6UXP9 181 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM91Q6ZNR0 172 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 OR4D5Q8NGN0 318 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 RARRES2Q99969 163 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 ELF5Q9UKW6 265 aaPredicted RBP10.78□□□□□ -0.68
HCFC1-202ENST00000369984 ADRA2AP08913 450 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 GGTLC2Q14390 218 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 RPP25Q9BUL9 199 aaKnown RBP10.78□□□□□ -0.68
HCFC1-202ENST00000369984 A0A1W2PQM1 296 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 CEACAM21Q3KPI0 293 aa10.78□□□□□ -0.68
HCFC1-202ENST00000369984 BGLAPP02818 100 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 MC5RP33032 325 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 ZNF488Q96MN9 340 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 GGACTQ9BVM4 153 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 QTRT1Q9BXR0 403 aaKnown RBP10.77□□□□□ -0.68
HCFC1-202ENST00000369984 C16orf97H3BN30 126 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 PRSS23O95084 383 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 GAPDHP04406 335 aaKnown RBP10.77□□□□□ -0.68
HCFC1-202ENST00000369984 SRIP30626 198 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 RPL8P62917 257 aaKnown RBP10.77□□□□□ -0.68
HCFC1-202ENST00000369984 TCF24Q7RTU0 167 aa10.77□□□□□ -0.68
HCFC1-202ENST00000369984 HELZP42694 1942 aaKnown RBP10.77□□□□□ -0.69
HCFC1-202ENST00000369984 DLL1O00548 723 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 OR5AN1Q8NGI8 311 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 RAX2Q96IS3 184 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 SCTP09683 121 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 ZNF688P0C7X2 276 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms