RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 MARVELD1Q9BSK0 173 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 C20orf85Q9H1P6 137 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 NUBP2Q9Y5Y2 271 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR5H14A6NHG9 310 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 IGLV2-14P01704 120 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 OR5H8P0DN80 308 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 AADACP22760 399 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 FCGR2CP31995 323 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 LUMP51884 338 aaPredicted RBP11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 CDK10Q15131 360 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 FAM71E2Q8N5Q1 922 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 CITED1Q99966 193 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 ALG5Q9Y673 324 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 CD74P04233 296 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 MMDQ15546 238 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 WNT10AQ9GZT5 417 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 EHFQ9NZC4 300 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 COPZ2Q9P299 210 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 WASHC3Q9Y3C0 194 aa11.95□□□□□ -0.5
SMPDL3A-201ENST00000368440 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 H7C2Y5 167 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 IGKV1-16P04430 117 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 RLN1P04808 185 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 IFNA6P05013 189 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 IDO2Q6ZQW0 420 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 C11orf44Q8N8P7 122 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 OR5H2Q8NGV7 314 aa11.94□□□□□ -0.5
SMPDL3A-201ENST00000368440 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 LINC00473A8K010 186 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 NDUFB6O95139 128 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 PPYP01298 95 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 CD300CQ08708 224 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 CBX3Q13185 183 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 MEF2DQ14814 521 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 OVCH2Q7RTZ1 564 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 OR8H1Q8NGG4 311 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 HSPB9Q9BQS6 159 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 LIN7CQ9NUP9 197 aaKnown RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 PEX14O75381 377 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 DHFRP00374 187 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 MC5RP33032 325 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 FXYD4P59646 89 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 TSPAN5P62079 268 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 RBMS2Q15434 407 aaKnown RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 GIMAP1Q8WWP7 306 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 SLC35D1Q9NTN3 355 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 ZNF107Q9UII5 783 aaPredicted RBP11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
SMPDL3A-201ENST00000368440 NBR2O15453 112 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 NDUFA3O95167 84 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 IGHG2P01859 326 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 APOA2P02652 100 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 THBS3P49746 956 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 TAS2R46P59540 309 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 NPBQ8NG41 125 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 DEDD2Q8WXF8 326 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 DDB2Q92466 427 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 NOL4LQ96MY1 436 aaPredicted RBP11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 SCP2D1Q9UJQ7 156 aa11.92□□□□□ -0.5
SMPDL3A-201ENST00000368440 EIF4EBP1Q13541 118 aaPredicted RBP11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 SLC35E3Q7Z769 313 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 TMEM17Q86X19 198 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 PDPNQ86YL7 162 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 BVESQ8NE79 360 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 CD28P10747 220 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 OR13C8Q8NGS7 320 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 PRRT1Q99946 306 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 NEURL2Q9BR09 285 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 SEC22CQ9BRL7 303 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 FBXL15Q9H469 300 aa11.91□□□□□ -0.5
SMPDL3A-201ENST00000368440 TET2Q6N021 2002 aaPredicted RBP11.9□□□□□ -0.5
SMPDL3A-201ENST00000368440 TBPP20226 339 aa11.9□□□□□ -0.5
SMPDL3A-201ENST00000368440 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.5
SMPDL3A-201ENST00000368440 ACTBL2Q562R1 376 aa11.9□□□□□ -0.5
SMPDL3A-201ENST00000368440 OR2B11Q5JQS5 317 aa11.9□□□□□ -0.5
SMPDL3A-201ENST00000368440 DHRS11Q6UWP2 260 aa11.9□□□□□ -0.5
SMPDL3A-201ENST00000368440 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 RRHO14718 337 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms