RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MIEN1Q9BRT3 115 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 TIMM21Q9BVV7 248 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 PSMD13Q9UNM6 376 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 POLR3HQ9Y535 204 aaPredicted RBP1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 FAM215AQ9Y5M1 114 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 REREQ9P2R6 1566 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 CR1P17927 2039 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 CCDC88CQ9P219 2028 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 A0A087WUU8 490 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 OR6C6A6NF89 314 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 TMEM235A6NFC5 223 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 RFPL4AA6NLU0 287 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 RFPL4AL1F8VTS6 287 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 CETN3O15182 167 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 MT-CO2P00403 227 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 PRB1P04280 392 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 HLA-DQB2P05538 268 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 REG1BP48304 166 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 HINT1P49773 126 aaPredicted RBP1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 BLVRAP53004 296 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 RBM11P57052 281 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 TAS2R30P59541 319 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 EIF4G1Q04637 1599 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 MLLT11Q13015 90 aaPredicted RBP1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 Q6ZRN7 208 aaPredicted RBP1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 CPAMD8Q8IZJ3 1885 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 SMCR5Q8TEV8 140 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 MS4A6EQ96DS6 147 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 CMTM5Q96DZ9 223 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 DHRS9Q9BPW9 319 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 BABAM2Q9NXR7 383 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 C15orf41Q9Y2V0 281 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 KLK5Q9Y337 293 aaPredicted RBP1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 ATP6V1DQ9Y5K8 247 aa1.19□□□□□ -2.22
ECHDC1-201ENST00000368287 ZFHX2Q9C0A1 2572 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 RTEL1-TNFRSF6BF6WH68 1400 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 IGLV3-9A0A075B6K5 115 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 C5orf49A4QMS7 147 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 ARRDC5A6NEK1 342 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 YEATS4O95619 227 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 BPGMP07738 259 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 CCR2P41597 374 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 GABRA2P47869 451 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 PRDX4Q13162 271 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 ZNF791Q3KP31 576 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 CST9Q5W186 159 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 FAM9CQ8IZT9 166 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 TMEM161BQ8NDZ6 487 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 OR51T1Q8NGJ9 327 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 RAB2BQ8WUD1 216 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 ANKRD36BP1Q96IX9 119 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 MAP1LC3AQ9H492 121 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 HRASLSQ9HDD0 168 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 SPANXB1Q9NS25 103 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 NDUFB11Q9NX14 153 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 DKKL1Q9UK85 242 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 COQ4Q9Y3A0 265 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 ABCC12Q96J65 1359 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 KIF15Q9NS87 1388 aa1.18□□□□□ -2.22
ECHDC1-201ENST00000368287 GREB1Q4ZG55 1949 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 HEATR5AQ86XA9 2040 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 KDM5BQ9UGL1 1544 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 TMSB15BA0A087X1C1 80 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 TRGV5A0A0B4J1U4 118 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 EVPLLA8MZ36 301 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 C9JCJ5 164 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 J3QQQ9 107 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 NDUFB2O95178 105 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 TPM3P06753 285 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 DEFA4P12838 97 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 CCL1P22362 96 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 RPL26P61254 145 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 TBPL1P62380 186 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 ZNF90Q03938 601 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 EBPQ15125 230 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 C1orf194Q5T5A4 169 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 SBSNQ6UWP8 590 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 FAM151BQ6UXP7 276 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 RASSF6Q6ZTQ3 369 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 COMMD7Q86VX2 200 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 LHFPL1Q86WI0 220 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 UBL4BQ8N7F7 174 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 OR2T27Q8NH04 317 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 DDI1Q8WTU0 396 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 C12orf43Q96C57 262 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 RPL26L1Q9UNX3 145 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 RBM7Q9Y580 266 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 SDK1Q7Z5N4 2213 aa1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 DENND4BO75064 1496 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-201ENST00000368287 RGS12O14924 1447 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 MYH11P35749 1972 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 CUL9Q8IWT3 2517 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 ZNF705FA8MVS1 300 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 C2orf74A8MZ97 194 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 BHLHE40O14503 412 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 COX7A2LO14548 114 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 PFDN6O15212 129 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 RPL12P30050 165 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 MAGEA2P43356 314 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 RPL27AP46776 148 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms