RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 ALDH3A1P30838 453 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 REG1BP48304 166 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 TMEM267Q0VDI3 215 aaPredicted RBP0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 LCN8Q6JVE9 175 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 DCXRQ7Z4W1 244 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 TLCD1Q96CP7 247 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 SMIM12Q96EX1 92 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 REG4Q9BYZ8 158 aa0.32□□□□□ -2.36
RNU6-553P-201ENST00000364047 BAZ2BQ9UIF8 2168 aaKnown RBP0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 TRAV8-1A0A0A6YYK1 113 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 A0A0J9YW62 118 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 M0R381 172 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 NDUFS8O00217 210 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 CREBL2O60519 120 aaPredicted RBP0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 DLX6P56179 175 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 SNAP25P60880 206 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 OR4D1Q15615 310 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 TMEM86AQ8N2M4 240 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 MS4A6EQ96DS6 147 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 SERPINB11Q96P15 392 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 TMEM208Q9BTX3 173 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 EMC3Q9P0I2 261 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 POLEQ07864 2286 aa0.31□□□□□ -2.36
RNU6-553P-201ENST00000364047 DSCAMO60469 2012 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 CACNA1BQ00975 2339 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 TRAV38-1A0A0B4J264 116 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 H3BT86 120 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 MPZL2O60487 215 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 LGALS1P09382 135 aaKnown RBP0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 ETV1P50549 477 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 TMEM33P57088 247 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 TAS2R20P59543 309 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 AP1S1P61966 158 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 TBPL1P62380 186 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 HIST1H4AP62805 103 aaKnown RBP0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 PLPPR5Q32ZL2 321 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 C9orf163Q8N9P6 203 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 Q8WTZ3 238 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 C12orf43Q96C57 262 aaKnown RBP0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 CCDC124Q96CT7 223 aaKnown RBP0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 WDR90Q96KV7 1748 aa0.3□□□□□ -2.36
RNU6-553P-201ENST00000364047 MYOFQ9NZM1 2061 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 INTS1Q8N201 2190 aaKnown RBP0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 H0YC42 278 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 SYNGR1O43759 233 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 FADS2O95864 444 aaKnown RBP0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 SLC35E2BP0CK96 405 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 CFL1P23528 166 aaKnown RBP0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 RPL28P46779 137 aaKnown RBP0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 STX3Q13277 289 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 DYNC2LI1Q8TCX1 351 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 LRRC45Q96CN5 670 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 MSANTD3Q96H12 275 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 MRPL57Q9BQC6 102 aaKnown RBP0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 POFUT2Q9Y2G5 429 aa0.29□□□□□ -2.36
RNU6-553P-201ENST00000364047 LAMB4A4D0S4 1761 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 MEIS3P1A6NDR6 274 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 OR6C6A6NF89 314 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 GOLGA8RI6L899 631 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 CCDC172P0C7W6 258 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 TRGC1P0CF51 173 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 H2BFSP57053 126 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 RAB14P61106 215 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 UMODL1-AS1Q8N2C9 162 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 ZNF439Q8NDP4 499 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 CHST6Q9GZX3 395 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
RNU6-553P-201ENST00000364047 OR51F1A6NGY5 319 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 C9JCJ5 164 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 MT-CO2P00403 227 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 GP1BAP07359 652 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 PVALBP20472 110 aaPredicted RBP0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 AKR1C1Q04828 323 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 CLEC12BQ2HXU8 276 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 RBM48Q5RL73 367 aaKnown RBP0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 C10orf55Q5SWW7 151 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 C9orf64Q5T6V5 341 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 RNASEH2CQ8TDP1 164 aaKnown RBP0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 PARVAQ9NVD7 372 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 NAT8Q9UHE5 227 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 FLT4P35916 1363 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 SCAF11Q99590 1463 aaKnown RBP0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 REREQ9P2R6 1566 aa0.27□□□□□ -2.37
RNU6-553P-201ENST00000364047 MYH11P35749 1972 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 IBA57-AS1B1ANH7 110 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 PPBPP02775 128 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 ATP5G1P05496 136 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 LCN1P31025 176 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 HPCAP84074 193 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 GNA13Q14344 377 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 ACSM3Q53FZ2 586 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 SLC22A24Q8N4F4 322 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 RPP25LQ8N5L8 163 aaKnown RBP0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 ASCL3Q9NQ33 180 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 HDGFL3Q9Y3E1 203 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 GMEB1Q9Y692 573 aa0.26□□□□□ -2.37
RNU6-553P-201ENST00000364047 ABCC12Q96J65 1359 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms