RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 HLA-DPA1P20036 260 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 MP68P56378 58 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 ACTBP60709 375 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 ACTG1P63261 375 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 STX5Q13190 355 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 WFDC2Q14508 124 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 ZNF826PQ6ZT77 177 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 C10orf107Q8IVU9 208 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 FBXO36Q8NEA4 188 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 OR8G5Q8NG78 346 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 OR4A4PQ8NGN8 299 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 SFT2D1Q8WV19 159 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 TMEM234Q8WY98 164 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 TUBGCP3Q96CW5 907 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 TBC1D31Q96DN5 1066 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 TRNT1Q96Q11 434 aaKnown RBP-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 SLC7A5P2Q9GIP4 190 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 PSTPIP2Q9H939 334 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 LIN28AQ9H9Z2 209 aaKnown RBP-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 C12orf4Q9NQ89 552 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 RAB20Q9NX57 234 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 SACSQ9NZJ4 4579 aa-2.08□□□□□ -2.74
RNU6-340P-201ENST00000364005 RNF103-CHMP3A0A140T963 221 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 FAM240AA0A1B0GVK7 77 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 H3BSA7 217 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 ACOX3O15254 700 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 CCL16O15467 120 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 CYB5BO43169 146 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 FGF16O43320 207 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 FCN3O75636 299 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 PSMG1O95456 288 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 MT1AP04731 61 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 GFAPP14136 432 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 CA7P43166 264 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 CAMLGP49069 296 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 TAS2R39P59534 338 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 AP1S1P61966 158 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 RHOGP84095 191 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 MRPL23Q16540 153 aaKnown RBP-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 SLC8B1Q6J4K2 584 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 FAHD1Q6P587 224 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 AAED1Q7RTV5 226 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 ZBTB8OSQ8IWT0 167 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 TTC29Q8NA56 475 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 GATD1Q8NB37 220 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 C4orf3Q8WVX3 66 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 MED18Q9BUE0 208 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 MCUBQ9NWR8 336 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 POLR3HQ9Y535 204 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 DNAH1Q9P2D7 4330 aa-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 PPRC1Q5VV67 1664 aaKnown RBP-2.09□□□□□ -2.74
RNU6-340P-201ENST00000364005 VPS13BQ7Z7G8 4022 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 A0A0C4DFX4 3053 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 BOLA2-SMG1P6H3BVE0 249 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 TNNI1P19237 187 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 FKBP2P26885 142 aaKnown RBP-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 RRM2P31350 389 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 SSR2P43308 183 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 CBX5P45973 191 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 GBX2P52951 348 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 FXYD7P58549 80 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 RAB10P61026 200 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 UBE2MP61081 183 aaKnown RBP-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 RCN1Q15293 331 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 CTSL3PQ5NE16 218 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 FAM162BQ5T6X4 162 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 EPGNQ6UW88 154 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 PATE2Q6UY27 113 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 SETD3Q86TU7 594 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 NELFCDQ8IXH7 590 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 DAND5Q8N907 189 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 OR13C8Q8NGS7 320 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 ACOT12Q8WYK0 555 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 SPXQ9BT56 116 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 UCK2Q9BZX2 261 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 SLC39A9Q9NUM3 307 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 DDIT4Q9NX09 232 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 COQ4Q9Y3A0 265 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 KLF12Q9Y4X4 402 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 ITPR2Q14571 2701 aa-2.1□□□□□ -2.75
RNU6-340P-201ENST00000364005 SIP14410 1827 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 TRAV12-1A0A0B4J245 112 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 INMT-MINDY4F8WBC2 141 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 PIRO00625 290 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 LYZL6O75951 148 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 CLPSP04118 112 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 KLK1P06870 262 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 MSMBP08118 114 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 TFPTP0C1Z6 253 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 MYL2P10916 166 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 NCF1P14598 390 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 CDK2P24941 298 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 MSNP26038 577 aaKnown RBP-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 PYCR1P32322 319 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 CCT6AP40227 531 aaKnown RBP-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 FXYD2P54710 66 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 C21orf59P57076 290 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 PAFAH1B2P68402 229 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 CEACAM16Q2WEN9 425 aa-2.11□□□□□ -2.75
RNU6-340P-201ENST00000364005 SPATA45Q537H7 98 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms