RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 C9orf139Q6ZV77 190 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 KCTD9Q7L273 389 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 CMTM1Q8IZ96 169 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 FAM216AQ8WUB2 273 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 ZNF486Q96H40 463 aaPredicted RBP8.64□□□□□ -1.03
SNX6-201ENST00000362031 MS4A7Q9GZW8 240 aaPredicted RBP8.64□□□□□ -1.03
SNX6-201ENST00000362031 GHITMQ9H3K2 345 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 NAA60Q9H7X0 242 aa8.64□□□□□ -1.03
SNX6-201ENST00000362031 C3orf85A0A1B0GTC6 90 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 SLC22A5O76082 557 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 IL3RAP26951 378 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 CNTFRP26992 372 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 ECI1P42126 302 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 DHRS2Q13268 280 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 HABP2Q14520 560 aaPredicted RBP8.63□□□□□ -1.03
SNX6-201ENST00000362031 HNF4GQ14541 408 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 TRIM16LQ309B1 348 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 LIN54Q6MZP7 749 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 FAM71F2Q6NXP2 309 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 ZNF66Q6ZN08 573 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 VKORC1L1Q8N0U8 176 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 ZBTB34Q8NCN2 500 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 HSD17B10Q99714 261 aaKnown RBP8.63□□□□□ -1.03
SNX6-201ENST00000362031 MEGF9Q9H1U4 602 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 TEX13DA0A0J9YY54 714 aaPredicted RBP8.63□□□□□ -1.03
SNX6-201ENST00000362031 C9orf170A2RU37 121 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 VENTXO95231 258 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 IGHV4-59P01825 116 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 SNRNP70P08621 437 aaKnown RBP8.63□□□□□ -1.03
SNX6-201ENST00000362031 RPA2P15927 270 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 VAMP1P23763 118 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 SRP14P37108 136 aaKnown RBP8.63□□□□□ -1.03
SNX6-201ENST00000362031 CEACAM3P40198 252 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 TMEM187Q14656 261 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 TMEM128Q5BJH2 165 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 ZNF600Q6ZNG1 722 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 SPAG16Q8N0X2 631 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 CASTOR1Q8WTX7 329 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 TMEM160Q9NX00 188 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
SNX6-201ENST00000362031 A0A0A6YYJ9 748 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 FAM90A9PA6NNJ1 464 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 S1PR2O95136 353 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 HLA-AP01891 365 aaKnown RBP8.62□□□□□ -1.03
SNX6-201ENST00000362031 THBS3P49746 956 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 F2RL1P55085 397 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 TATDN3Q17R31 274 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 IZUMO4Q1ZYL8 232 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 SCGB3A2Q96PL1 93 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 DUX5Q96PT3 197 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 ALX4Q9H161 411 aaPredicted RBP8.62□□□□□ -1.03
SNX6-201ENST00000362031 SLC35D1Q9NTN3 355 aa8.62□□□□□ -1.03
SNX6-201ENST00000362031 ATRQ13535 2644 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 H7C2Y5 167 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 SFT2D2O95562 160 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 S100A12P80511 92 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 IFITM2Q01629 132 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 TMEM219Q86XT9 240 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 OR8H3Q8N146 312 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 SIGLECL1Q8N7X8 197 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 GALNT14Q96FL9 552 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 SSX3Q99909 188 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 TMEM222Q9H0R3 208 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 H0Y980 276 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 H3BUX3 64 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 IGLV2-23P01705 113 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 FBP1P09467 338 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 UCP1P25874 307 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 LPAR6P43657 344 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 LY6EQ16553 131 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 LYG2Q86SG7 212 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 SGPP2Q8IWX5 399 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 CCDC71LQ8N9Z2 235 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 TAF15Q92804 592 aaKnown RBP eCLIP8.61□□□□□ -1.034e-6■■□□□ 11.5
SNX6-201ENST00000362031 EAF1Q96JC9 268 aaPredicted RBP8.61□□□□□ -1.03
SNX6-201ENST00000362031 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 PLSCR3Q9NRY6 295 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 ALG5Q9Y673 324 aa8.61□□□□□ -1.03
SNX6-201ENST00000362031 A0A0G2JRQ6 117 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 OOSP1A8MZH6 123 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 CDS2O95674 445 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 IFNA2P01563 188 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 IGKV1-5P01602 117 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 CD1BP29016 333 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 IER3P46695 156 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 BPIFB3P59826 476 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 CCDC144NLQ6NUI1 221 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 Q6YL49 198 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 LYZL2Q7Z4W2 148 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 SELENOHQ8IZQ5 122 aaKnown RBP8.6□□□□□ -1.03
SNX6-201ENST00000362031 Q8N6K4 173 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 PRDM13Q9H4Q3 707 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 TPSG1Q9NRR2 321 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms